RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 SGTBQ96EQ0 304 aa12.66□□□□□ -0.38
NUP54-216ENST00000514901 CLPTM1LQ96KA5 538 aa12.66□□□□□ -0.38
NUP54-216ENST00000514901 MOGAT1Q96PD6 335 aa12.66□□□□□ -0.38
NUP54-216ENST00000514901 ZNF587Q96SQ5 575 aaPredicted RBP12.66□□□□□ -0.38
NUP54-216ENST00000514901 PIP5K1AQ99755 562 aa12.66□□□□□ -0.38
NUP54-216ENST00000514901 HDHD5Q9BXW7 423 aa12.66□□□□□ -0.38
NUP54-216ENST00000514901 MAGIXQ9H6Y5 334 aa12.66□□□□□ -0.38
NUP54-216ENST00000514901 IL1RAPQ9NPH3 570 aa12.66□□□□□ -0.38
NUP54-216ENST00000514901 V9GYQ6 96 aa12.66□□□□□ -0.38
NUP54-216ENST00000514901 OR6C65A6NJZ3 312 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 AQP12BA6NM10 295 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 C16orf97H3BN30 126 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 hCG_2039718K7EN88 272 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 EBAG9O00559 213 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 KPNA4O00629 521 aaPredicted RBP12.65□□□□□ -0.38
NUP54-216ENST00000514901 PLPP3O14495 311 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 ACOT8O14734 319 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 OR6A2O95222 327 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 FABP3P05413 133 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 ATP6V1B2P21281 511 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 KIR2DL3P43628 341 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 UGT2B15P54855 530 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 CBX1P83916 185 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 VLDLRP98155 873 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 PUDPQ08623 228 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 C1DQ13901 141 aaKnown RBP12.65□□□□□ -0.38
NUP54-216ENST00000514901 P2RY6Q15077 328 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 FAM98BQ52LJ0 330 aaKnown RBP12.65□□□□□ -0.38
NUP54-216ENST00000514901 ZNF730Q6ZMV8 503 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 CCDC121Q6ZUS5 278 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 CREB3L2Q70SY1 520 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 RRM2BQ7LG56 351 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 PIWIL3Q7Z3Z3 882 aaKnown RBP12.65□□□□□ -0.38
NUP54-216ENST00000514901 TSEN54Q7Z6J9 526 aaKnown RBP12.65□□□□□ -0.38
NUP54-216ENST00000514901 PXKQ7Z7A4 578 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 AQP12AQ8IXF9 295 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 CDK20Q8IZL9 346 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 LIPHQ8WWY8 451 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 USB1Q9BQ65 265 aaKnown RBP12.65□□□□□ -0.38
NUP54-216ENST00000514901 CADM1Q9BY67 442 aaKnown RBP12.65□□□□□ -0.38
NUP54-216ENST00000514901 OR10A4Q9H209 315 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 MEPEQ9NQ76 525 aaPredicted RBP12.65□□□□□ -0.38
NUP54-216ENST00000514901 MAN2C1Q9NTJ4 1040 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 RHCGQ9UBD6 479 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 NDRG3Q9UGV2 375 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 GPR52Q9Y2T5 361 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 NOX1Q9Y5S8 564 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 CRYBG3Q68DQ2 2970 aa12.65□□□□□ -0.38
NUP54-216ENST00000514901 TCRBV5S2A0A599 114 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 TUBAL3A6NHL2 446 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 MS4A18H0YCH9 400 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 AKAP8O43823 692 aaKnown RBP12.64□□□□□ -0.39
NUP54-216ENST00000514901 OR7A10O76100 309 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 ASAH2BP0C7U1 165 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 UMPSP11172 480 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 FUT1P19526 365 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 PTNP21246 168 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 CBLP22681 906 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 UGT2B10P36537 528 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 IL1RL1Q01638 556 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 CHRNB3Q05901 458 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 FAM27E3Q08E93 113 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 ZP4Q12836 540 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 FOXD4Q12950 439 aaPredicted RBP12.64□□□□□ -0.39
NUP54-216ENST00000514901 EXOC3L2Q2M3D2 409 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 MS4A18Q3C1V0 323 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 IQCCQ4KMZ1 466 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 FBXW9Q5XUX1 488 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 CASP12Q6UXS9 341 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 Q6ZT83 130 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 MBOAT2Q6ZWT7 520 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 AAED1Q7RTV5 226 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 EPHX4Q8IUS5 362 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 ZDHHC21Q8IVQ6 265 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 UEVLDQ8IX04 471 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 ZIC4Q8N9L1 334 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 PFN4Q8NHR9 129 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 FAM222BQ8WU58 562 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 DHRS1Q96LJ7 313 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 B3GAT1Q9P2W7 334 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 KCNN3Q9UGI6 736 aa12.64□□□□□ -0.39
NUP54-216ENST00000514901 ENO4A6NNW6 628 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 KRT36O76013 467 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 ADORA3P0DMS8 318 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 PPP3CBP16298 524 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 PSMB1P20618 241 aaKnown RBP12.63□□□□□ -0.39
NUP54-216ENST00000514901 NTF4P34130 210 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 PRKCDQ05655 676 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 ANKDD1AQ495B1 522 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 SLC46A3Q7Z3Q1 461 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 LSRQ86X29 649 aaPredicted RBP12.63□□□□□ -0.39
NUP54-216ENST00000514901 GABRG1Q8N1C3 465 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 KDM8Q8N371 416 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 POMGNT2Q8NAT1 580 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 ANKK1Q8NFD2 765 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 MARVELD3Q96A59 401 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 BPIFA2Q96DR5 249 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 DACH2Q96NX9 599 aa12.63□□□□□ -0.39
NUP54-216ENST00000514901 ZNF385AQ96PM9 386 aaKnown RBP12.63□□□□□ -0.39
NUP54-216ENST00000514901 SEPHS2Q99611 448 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms