RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 GIMD1P0DJR0 217 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 ZNF30P17039 623 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 IL10P22301 178 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 IDSP22304 550 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 TRIM23P36406 574 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 CDKN2BP42772 138 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 MAGEA4P43358 317 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 MARCKSL1P49006 195 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 SPINT3P49223 89 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 STC1P52823 247 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 SLC26A5P58743 744 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 RPL26P61254 145 aaKnown RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 OTUD4Q01804 1114 aaKnown RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 PPIDQ08752 370 aaKnown RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 RIGQ13278 110 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 LY6DQ14210 128 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 SIX1Q15475 284 aaPredicted RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 ISXQ2M1V0 245 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 C14orf28Q4W4Y0 310 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 KCTD16Q68DU8 428 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 TMEM220Q6QAJ8 160 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 FAM151BQ6UXP7 276 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 GPRIN3Q6ZVF9 776 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 GLT6D1Q7Z4J2 308 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 P4HA3Q7Z4N8 544 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 TSEN54Q7Z6J9 526 aaKnown RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 RANBP3LQ86VV4 465 aaPredicted RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 CARM1Q86X55 608 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 KATNAL2Q8IYT4 538 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 ZNF567Q8N184 647 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 DNAAF3Q8N9W5 541 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 RELL2Q8NC24 303 aaPredicted RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 GPR26Q8NDV2 337 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 OR6C4Q8NGE1 309 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 OR8H1Q8NGG4 311 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 OR52J3Q8NH60 311 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 OR10G6Q8NH81 332 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 WDR36Q8NI36 951 aaKnown RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 CCDC110Q8TBZ0 833 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 ACTL9Q8TC94 416 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 PATE1Q8WXA2 126 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 NABP1Q96AH0 204 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 ECHDC3Q96DC8 303 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 CXorf40BQ96DE9 158 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 IMP4Q96G21 291 aaKnown RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 PDXPQ96GD0 296 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 ELMO2Q96JJ3 720 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 C19orf43Q9BQ61 176 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 RAB17Q9H0T7 212 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 ADNPQ9H2P0 1102 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 ASB8Q9H765 288 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 LZTFL1Q9NQ48 299 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 CUTCQ9NTM9 273 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 SLC39A1Q9NY26 324 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 PAK5Q9P286 719 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 ATXN10Q9UBB4 475 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 PSMD13Q9UNM6 376 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 RPL26L1Q9UNX3 145 aaKnown RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 ATG4BQ9Y4P1 393 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 SDK1Q7Z5N4 2213 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 RALGAPA1Q6GYQ0 2036 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 ADAMTS9Q9P2N4 1935 aa3.4□□□□□ -1.86
HTT-210ENST00000512909 NPIPA5A0A0B4J1W7 369 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 IGKV3D-20A0A0C4DH25 116 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 GLYATL1P3A0A0U1RQE8 302 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 RGSL1A5PLK6 1076 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 OR2AG2A6NM03 316 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 EFCAB7A8K855 629 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 MIF4GDA9UHW6 222 aaKnown RBP3.4□□□□□ -1.87
HTT-210ENST00000512909 SHISA9B4DS77 424 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 NPIPA5E9PKD4 350 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 APOC4-APOC2K7ER74 178 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 CCL22O00626 93 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 TXNL1O43396 289 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 POP7O75817 140 aaKnown RBP3.4□□□□□ -1.87
HTT-210ENST00000512909 LCA5LO95447 670 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 GOT2P00505 430 aaKnown RBP3.4□□□□□ -1.87
HTT-210ENST00000512909 APOC2P02655 101 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 GP1BAP07359 652 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 IVLP07476 585 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 HOXC4P09017 264 aaPredicted RBP3.4□□□□□ -1.87
HTT-210ENST00000512909 SNRPCP09234 159 aaKnown RBP3.4□□□□□ -1.87
HTT-210ENST00000512909 RALBP11234 206 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 ETS1P14921 441 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 ZNF7P17097 686 aaPredicted RBP3.4□□□□□ -1.87
HTT-210ENST00000512909 SPAM1P38567 509 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 NPY2RP49146 381 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 CCL11P51671 97 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 SRYQ05066 204 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 XRCC4Q13426 336 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 IHHQ14623 411 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 CHRNA6Q15825 494 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 CLPPQ16740 277 aaPredicted RBP3.4□□□□□ -1.87
HTT-210ENST00000512909 HKDC1Q2TB90 917 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 GLIPR1L2Q4G1C9 344 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 PYCR3Q53H96 274 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 UNC50Q53HI1 259 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 HSP90AA5PQ58FG0 334 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 ZNF506Q5JVG8 444 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 IRGCQ6NXR0 463 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms