RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 YAE1D1Q9NRH1 226 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 ZFP92A6NM28 416 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 FADS1O60427 444 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 PTH2RP49190 550 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 HBG1P69891 147 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 HBG2P69892 147 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 PNCKQ6P2M8 343 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 SERPINA11Q86U17 422 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 DERL2Q9GZP9 239 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 A0A1B0GX78 115 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 ZNF264O43296 627 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 LYZL6O75951 148 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 AQP2P41181 271 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 C19orf57Q0VDD7 668 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 VMA21Q3ZAQ7 101 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 FAM182AQ5T1J6 154 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 TANGO2Q6ICL3 276 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 OR5AR1Q8NGP9 310 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 FIBINQ8TAL6 211 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 ITPAQ9BY32 194 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 LIN7BQ9HAP6 207 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 DUSP22Q9NRW4 184 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 IGHV3OR16-12A0A075B7B8 117 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 IGHV3-64DA0A0J9YX35 117 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 SOCS6O14544 535 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 DSCR3O14972 297 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 FURINP09958 794 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 APEX1P27695 318 aaKnown RBP8.29□□□□□ -1.08
VCAN-208ENST00000512590 OR6S1Q8NH40 331 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 BTBD2Q9BX70 525 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 GALPQ9UBC7 116 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 PLLPQ9Y342 182 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 MOB4Q9Y3A3 225 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 RPS10-NUDT3A0A1W2PQS6 291 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 SERPINE3A8MV23 424 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 DENRO43583 198 aaKnown RBP8.29□□□□□ -1.08
VCAN-208ENST00000512590 STC2O76061 302 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 ST6GAL1P15907 406 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 CYCSP99999 105 aaKnown RBP8.29□□□□□ -1.08
VCAN-208ENST00000512590 PPP1R3AQ16821 1122 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 HNRNPA1L2Q32P51 320 aaKnown RBP8.29□□□□□ -1.08
VCAN-208ENST00000512590 TMEM108Q6UXF1 575 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 CCDC190Q86UF4 302 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 DTWD2Q8NBA8 298 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 PTPMT1Q8WUK0 201 aaPredicted RBP8.29□□□□□ -1.08
VCAN-208ENST00000512590 LRTOMTQ8WZ04 291 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 ARL11Q969Q4 196 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 PPA2Q9H2U2 334 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 MED17Q9NVC6 651 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 COA4Q9NYJ1 87 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 TAS2R8Q9NYW2 309 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 POLDIP2Q9Y2S7 368 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 SLC22A7Q9Y694 548 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 ADGRB3O60242 1522 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 TMEM269A0A1B0GVZ9 245 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 TLCD2A6NGC4 264 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 K7EPK0 472 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 ST8SIA5O15466 376 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 SIX3O95343 332 aaPredicted RBP8.29□□□□□ -1.08
VCAN-208ENST00000512590 VNN1O95497 513 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 FBXO45P0C2W1 286 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 HOXC13P31276 330 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 RPS26P62854 115 aaKnown RBP8.29□□□□□ -1.08
VCAN-208ENST00000512590 EXOSC7Q15024 291 aaKnown RBP8.29□□□□□ -1.08
VCAN-208ENST00000512590 C1orf210Q8IVY1 113 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 FAM71E2Q8N5Q1 922 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 FITM2Q8N6M3 262 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 FNDC8Q8TC99 324 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 BCL7CQ8WUZ0 217 aaPredicted RBP8.29□□□□□ -1.08
VCAN-208ENST00000512590 IL22RA2Q969J5 263 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 TMBIM1Q969X1 311 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 DCTN5Q9BTE1 182 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 XYLT2Q9H1B5 865 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 EHFQ9NZC4 300 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 DBX1A6NMT0 343 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 GLAP06280 429 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 ARSBP15848 533 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 CELP19835 753 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 RPL5P46777 297 aaKnown RBP8.29□□□□□ -1.08
VCAN-208ENST00000512590 ZNF83P51522 516 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 JAM2P57087 298 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 VWA5B1Q5TIE3 1220 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 PTOV1Q86YD1 416 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 CHST14Q8NCH0 376 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 CCL17Q92583 94 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 AURKBQ96GD4 344 aaPredicted RBP8.29□□□□□ -1.08
VCAN-208ENST00000512590 HHIPL1Q96JK4 782 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 CGREF1Q99674 301 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 PTTG3PQ9NZH4 202 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 PRELID1Q9Y255 219 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 SPO11Q9Y5K1 396 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 KCPQ6ZWJ8 1503 aa8.29□□□□□ -1.08
VCAN-208ENST00000512590 TRGV10A0A0A0MS01 117 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 C2CD4BA6NLJ0 364 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 CLDN24A6NM45 220 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 HOXA3O43365 443 aaPredicted RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 ERP29P30040 261 aaKnown RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 MMP12P39900 470 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 ETV4P43268 484 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 MAP2K6P52564 334 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms