RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 LAMTOR1Q6IAA8 161 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 SLC16A9Q7RTY1 509 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 CMTM4Q8IZR5 234 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF433Q8N7K0 673 aaPredicted RBP16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 RPS4Y2Q8TD47 263 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 LIPHQ8WWY8 451 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 ACTR6Q9GZN1 396 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 RANBP3Q9H6Z4 567 aaPredicted RBP16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 WSB2Q9NYS7 404 aaPredicted RBP16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 ACOD1A6NK06 481 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 IFITM5A6NNB3 132 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 IDSB3KWA1 339 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 AIPO00170 330 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 H2AFB2P0C5Z0 115 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF24P17028 368 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 FASLGP48023 281 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 CTXN1P60606 82 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 ELOCQ15369 112 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 CD226Q15762 336 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 TCTE1Q5JU00 501 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 HES5Q5TA89 166 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 LINGO2Q7L985 606 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 PRSS45Q7RTY3 260 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 LUZP2Q86TE4 346 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 SNAPC3Q92966 411 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 CLIP3Q96DZ5 547 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF285Q96NJ3 590 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 LMF1Q96S06 567 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 ORAI3Q9BRQ5 295 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 SLC25A18Q9H1K4 315 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 H0YIG0 161 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 PIN1P1O15428 100 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 MT-ND4P03905 459 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 CLPSP04118 112 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 ATXN8OSP0DMR3 200 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 ANXA3P12429 323 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 SDHAP31040 664 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 GDNFP39905 211 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 CCR6P51684 374 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 SKP2Q13309 424 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 KLF9Q13886 244 aaPredicted RBP16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 FNDC7Q5VTL7 733 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 BTN2A1Q7KYR7 527 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 IZUMO1Q8IYV9 350 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF511Q8NB15 262 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 LSM14AQ8ND56 463 aaKnown RBP16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 FAM174AQ8TBP5 190 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 ADAD1Q96M93 576 aaKnown RBP16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 SLITRK2Q9H156 845 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 EXOSC3Q9NQT5 275 aaKnown RBP16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 UCKL1Q9NWZ5 548 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 HEATR5AQ86XA9 2040 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 A0A1B0GTQ1 180 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 CHURC1-FNTBB4DL54 471 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF264O43296 627 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 PRKNO60260 465 aaPredicted RBP16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 ZFPL1O95159 310 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 IL33O95760 270 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 CD1CP29017 333 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 FNTBP49356 437 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 NANOS3P60323 173 aaKnown RBP16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF684Q5T5D7 378 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 FAM122BQ7Z309 247 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 OR11H7Q8NGC8 314 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 DACT3Q96B18 629 aaPredicted RBP16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 MOGAT1Q96PD6 335 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 MRI1Q9BV20 369 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 PDE7BQ9NP56 450 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 MMP25Q9NPA2 562 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 TMEM184BQ9Y519 407 aaPredicted RBP16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 V9GY05 133 aa16.35■□□□□ 0.21
CCHCR1-228ENST00000509552 TMEM131Q92545 1883 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 SZT2Q5T011 3432 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 RPP14O95059 124 aaKnown RBP16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 PPICP45877 212 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 GABRA4P48169 554 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 C9orf62Q8N4C0 152 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 OR56B4Q8NH76 319 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF563Q8TA94 476 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF431Q8TF32 576 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 ORAI1Q96D31 301 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 AUNIPQ9H7T9 357 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 UCK1Q9HA47 277 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 PNO1Q9NRX1 252 aaKnown RBP16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF275Q9NSD4 429 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 GRHPRQ9UBQ7 328 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 MRTO4Q9UKD2 239 aaKnown RBP16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 SLCO1B1Q9Y6L6 691 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 SPTBP11277 2137 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 TMEM72A0PK05 275 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 OIP5O43482 229 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 UTS2O95399 124 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 ECDO95905 644 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 ANKRD34CP0C6C1 535 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 MAPK3P27361 379 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 LTBRP36941 435 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 MTFR2Q6P444 385 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 FAM199XQ6PEV8 388 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 CBLN3Q6UW01 205 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms