RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ZNF26P17031 533 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 IGHV1-2P23083 117 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 KDELR2P33947 212 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 IDUAP35475 653 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 UGT2B10P36537 528 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 CD79BP40259 229 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 RPS5P46782 204 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 OR3A2P47893 321 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 EEFSECP57772 596 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 OR2B6P58173 313 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 FHL1Q13642 323 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 GNA13Q14344 377 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC17A1Q14916 467 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 SGCBQ16585 318 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 EXOC3L2Q2M3D2 409 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 MMEL1Q495T6 779 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 ALG10BQ5I7T1 473 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 ENTPD8Q5MY95 495 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 PHYHD1Q5SRE7 291 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 OR2A2Q6IF42 318 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 PAQR6Q6TCH4 344 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 RINLQ6ZS11 566 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 GDF7Q7Z4P5 450 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 CPLX4Q7Z7G2 160 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 PATL1Q86TB9 770 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 KDM8Q8N371 416 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 PCYOX1LQ8NBM8 494 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 OR9K2Q8NGE7 335 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 OR52E4Q8NGH9 312 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 PFN4Q8NHR9 129 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC38A4Q969I6 547 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 DTNBP1Q96EV8 351 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 C14orf79Q96F83 325 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC41A3Q96GZ6 507 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 LURAP1Q96LR2 239 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 MCHR1Q99705 422 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 SSBP4Q9BWG4 385 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 AMBRA1Q9C0C7 1298 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 PIGMQ9H3S5 423 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 LIME1Q9H400 295 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 C12orf10Q9HB07 376 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 CHST11Q9NPF2 352 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 PLSCR4Q9NRQ2 329 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 C20orf141Q9NUB4 165 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 KLHL28Q9NXS3 571 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 NPAP1Q9NZP6 1156 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 TAGLN3Q9UI15 199 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 MCTS1Q9ULC4 181 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 PROCRQ9UNN8 238 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 TCRBV5S2A0A599 114 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ELOVL7A1L3X0 281 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF503-AS2A6NEH8 195 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 GJE1A6NN92 205 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF724A8MTY0 619 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 A8MVM7 634 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 KPNA4O00629 521 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ARPC2O15144 300 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 DNPH1O43598 174 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 CHP2O43745 196 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 CTAG2O75638 210 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 PDE5AO76074 875 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 SYNGR4O95473 234 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 SERPINA1P01009 418 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 C8BP07358 591 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 CBLP22681 906 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 GRPRP30550 384 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 HTR3AP46098 478 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 SELENOPP49908 381 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 VLDLRP98155 873 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 TLE4Q04727 773 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 RASGEF1BQ0VAM2 473 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 PIN1Q13526 163 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 KRT72Q14CN4 511 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 PDK3Q15120 406 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 OTUD3Q5T2D3 398 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 TSPO2Q5TGU0 170 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ANKRD34AQ69YU3 496 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ERICH5Q6P6B1 374 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 CBLL1Q75N03 491 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ARPINQ7Z6K5 226 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 CXorf67Q86X51 503 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 KRT73Q86Y46 540 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 PGAM4Q8N0Y7 254 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 LRRC17Q8N6Y2 441 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ADAMTS16Q8TE57 1224 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 UBASH3BQ8TF42 649 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 TMEM255BQ8WV15 326 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 CLPTM1LQ96KA5 538 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 C7orf34Q96L11 122 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 WFIKKN1Q96NZ8 548 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF607Q96SK3 696 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ECSITQ9BQ95 431 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF559Q9BR84 538 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 FUZQ9BT04 418 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 POTEKPQ9BYX7 375 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 HHATLQ9HCP6 504 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC7A10Q9NS82 523 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 GID8Q9NWU2 228 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ADPRHL2Q9NX46 363 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 PAQR5Q9NXK6 330 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms