RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 NOS3P29474 1203 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 OR3A3P47888 321 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC16A1P53985 500 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 P2RX3P56373 397 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF85Q03923 595 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC3A1Q07837 685 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FUT7Q11130 342 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 ESCO2Q56NI9 601 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 C1orf189Q5VU69 101 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 RPL22L1Q6P5R6 122 aaKnown RBP10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 WDR74Q6RFH5 385 aaPredicted RBP10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 MAMSTRQ6ZN01 415 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 KANSL1Q7Z3B3 1105 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 MAML2Q8IZL2 1156 aaPredicted RBP10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 C9orf62Q8N4C0 152 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 EID2Q8N6I1 236 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 OR2I1PQ8NGU4 316 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 PFN4Q8NHR9 129 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 PTPMT1Q8WUK0 201 aaPredicted RBP10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 CNOT9Q92600 299 aaKnown RBP10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 PGLYRP3Q96LB9 341 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 GPR137Q96N19 417 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 ABHD1Q96SE0 405 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 TBX5Q99593 518 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 OR51J1Q9H342 316 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 MED20Q9H944 212 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 PRMT8Q9NR22 394 aaPredicted RBP10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FGF21Q9NSA1 209 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 A0A0B4J2E0 115 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 LY6G6EA0A0G2JKS1 128 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 TEX13CA0A0J9YWL9 993 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 A0A1B0GX12 115 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 NAP1L6A6NFF2 107 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 A8MUA0 341 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 ERVH48-1M5A8F1 160 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 PDCD5O14737 125 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FABP7O15540 132 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FLRT2O43155 660 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 LAMTOR5O43504 91 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 GPRIN2O60269 458 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FUT1P19526 365 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 EVI2BP34910 448 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FOXL2P58012 376 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 HSF2Q03933 536 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 TCF15Q12870 199 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 GGTLC2Q14390 218 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FCN2Q15485 313 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 COL28A1Q2UY09 1125 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 HLA-BQ31612 363 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC36A2Q495M3 483 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 VWA2Q5GFL6 755 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FAM69AQ5T7M9 428 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FAM205BPQ63HN1 556 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF574Q6ZN55 896 aaPredicted RBP10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 BTN2A1Q7KYR7 527 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 KRT74Q7RTS7 529 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FGD2Q7Z6J4 655 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 WDR5BQ86VZ2 330 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 PRSS58Q8IYP2 241 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 CARFQ8N187 725 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FAM109AQ8N4B1 249 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF615Q8N8J6 731 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 OR56B4Q8NH76 319 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 HAVCR2Q8TDQ0 301 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 SAP25Q8TEE9 199 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF431Q8TF32 576 aaPredicted RBP10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 C15orf40Q8WUR7 153 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 GHSRQ92847 366 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 HGDQ93099 445 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 PHF21AQ96BD5 680 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF501Q96CX3 271 aaPredicted RBP10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 ATP13A2Q9NQ11 1180 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 PNO1Q9NRX1 252 aaKnown RBP10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 C20orf141Q9NUB4 165 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 GMEB2Q9UKD1 530 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 ZMIZ1Q9ULJ6 1067 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 SPATA2Q9UM82 520 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 U3KQA8 63 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 ADAMTS20P59510 1910 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 FER1L5A0AVI2 2057 aa10.07□□□□□ -0.8
SH3RF1-203ENST00000508685 TNRC6BQ9UPQ9 1833 aaKnown RBP10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 PATE3B3GLJ2 98 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF879B4DU55 563 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 SIGLEC6O43699 453 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 LANCL1O43813 399 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 PRAF2O60831 178 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 TPPPO94811 219 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ECDO95905 644 aaPredicted RBP10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 CFIP05156 583 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 HOXD11P31277 338 aaPredicted RBP10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 PYCR1P32322 319 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 BTCP35070 178 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 OR12D2P58182 307 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 E2F1Q01094 437 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ISXQ2M1V0 245 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC35D3Q5M8T2 416 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 BCL2L15Q5TBC7 163 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ZBTB37Q5TC79 503 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF550Q7Z398 422 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms