RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 FBN3Q75N90 2809 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 OR6C65A6NJZ3 312 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 VWC2LB2RUY7 222 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 CLIC1O00299 241 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 PHF1O43189 567 aaPredicted RBP10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 CRYAAP02489 173 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 CECR9P0C854 216 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 CALCRP30988 508 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 SERPINF1P36955 418 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 CLDN17P56750 224 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 NAAAQ02083 359 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 EGR4Q05215 589 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 GGTLC2Q14390 218 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 CARTPTQ16568 116 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 ANKRD16Q6P6B7 361 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 VHLLQ6RSH7 139 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 SLC46A3Q7Z3Q1 461 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 ANKS4BQ8N8V4 417 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 BBS10Q8TAM1 723 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 MAGEE2Q8TD90 523 aaPredicted RBP10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 TMEM158Q8WZ71 300 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 GTF2H4Q92759 462 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 KTI12Q96EK9 354 aaPredicted RBP10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 VRK1Q99986 396 aaPredicted RBP10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 PIMREGQ9BSJ6 248 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 BEX2Q9BXY8 128 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 RAD21L1Q9H4I0 556 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 BCL2L10Q9HD36 194 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 CRNNQ9UBG3 495 aaPredicted RBP10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 RPS6KB2Q9UBS0 482 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 LPAR3Q9UBY5 353 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 RCE1Q9Y256 329 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 PCDHB14Q9Y5E9 798 aa10.04□□□□□ -0.8
HMGCS1-204ENST00000507293 C5orf58C9J3I9 102 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 SLC43A1O75387 559 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 PDE5AO76074 875 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 ZNF432O94892 652 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 IGLV1-44P01699 117 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 OR4A8P0C604 315 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 BMP2P12643 396 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 ZNF43P17038 809 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 HOXB9P17482 250 aaPredicted RBP10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 PAX7P23759 505 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 NR4A2P43354 598 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 GZMKP49863 264 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 SLC18A1P54219 525 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 SH3BGRP55822 239 aaPredicted RBP10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 MAGOHP61326 146 aaKnown RBP10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 ARF1P84077 181 aaKnown RBP10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 FADDQ13158 208 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 ADIPOQQ15848 244 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 C3orf36Q3SXR2 165 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 C6orf89Q6UWU4 347 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 MYPOPQ86VE0 399 aaPredicted RBP10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 ARIH2OSQ8N7S6 290 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 NFKBIDQ8NI38 313 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 SLC35B4Q969S0 331 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 OXGR1Q96P68 337 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 ZNF317Q96PQ6 595 aaPredicted RBP10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 SHARPINQ9H0F6 387 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 B3GAT1Q9P2W7 334 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 USH1CQ9Y6N9 552 aa10.03□□□□□ -0.8
HMGCS1-204ENST00000507293 IGKV1D-42A0A075B6H8 117 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 IGHV4-61A0A0C4DH41 118 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 A0A1B0GWA3 101 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 B9A039 149 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 M0R082 166 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 NDUFS8O00217 210 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 AIM2O14862 343 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 LMX1BO60663 402 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 FZD7O75084 574 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 CELA3BP08861 270 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 APEHP13798 732 aaKnown RBP10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 CBLP22681 906 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 IGFBP5P24593 272 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 HTR2AP28223 471 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 PRKAR1BP31321 381 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 IDH3GP51553 393 aaPredicted RBP10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 STX1BP61266 288 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 IL1RL1Q01638 556 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 C1DQ13901 141 aaKnown RBP10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 EFNB3Q15768 340 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 GCNT6Q5T4J0 391 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 IL17RELQ6ZVW7 336 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 COMTD1Q86VU5 262 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 GPR137CQ8N3F9 429 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 GOLGA6L1Q8N7Z2 621 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 ZNF417Q8TAU3 575 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 SLC38A4Q969I6 547 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 TAAR8Q969N4 342 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 TLCD1Q96CP7 247 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 FOXN4Q96NZ1 517 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 ZNF587Q96SQ5 575 aaPredicted RBP10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 PRR14Q9BWN1 585 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 RSPO3Q9BXY4 272 aaPredicted RBP10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 PLK3Q9H4B4 646 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 CHODLQ9H9P2 273 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 C12orf10Q9HB07 376 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 GPR35Q9HC97 309 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 MOV10Q9HCE1 1003 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms