RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 HOXC5Q00444 222 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 GABPB1Q06547 395 aaPredicted RBP10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 C1DQ13901 141 aaKnown RBP10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 SWI5Q1ZZU3 235 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 C3orf36Q3SXR2 165 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 C6orf52Q5T4I8 152 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 C6orf89Q6UWU4 347 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 NET1Q7Z628 596 aaPredicted RBP10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 KRT73Q86Y46 540 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 LSMEM1Q8N8F7 131 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 ANKK1Q8NFD2 765 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 C10orf105Q8TEF2 133 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 BCL2L2Q92843 193 aaPredicted RBP10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 MAL2Q969L2 176 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 C7orf26Q96N11 449 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 OXGR1Q96P68 337 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 ALKBH3Q96Q83 286 aaPredicted RBP10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 TCF7L2Q9NQB0 619 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 RCE1Q9Y256 329 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 PRR14LQ5THK1 2151 aa10.52□□□□□ -0.73
PDLIM7-214ENST00000505746 VSTM5A8MXK1 200 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 RPL36A-HNRNPH2H7BZ11 118 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 AIM2O14862 343 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 AKAP8O43823 692 aaKnown RBP10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 SLC43A1O75387 559 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 USF1P22415 310 aaPredicted RBP10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 CLDN17P56750 224 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 GNGT1P63211 74 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 ROR2Q01974 943 aaKnown RBP10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 GUCY1A3Q02108 690 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 EGR4Q05215 589 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 LGALS3BPQ08380 585 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 MST1LQ2TV78 715 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 GCNT6Q5T4J0 391 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 FAM69AQ5T7M9 428 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 CYB5R2Q6BCY4 276 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 REEP3Q6NUK4 255 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 BLOC1S3Q6QNY0 202 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 KDM8Q8N371 416 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 GPR137CQ8N3F9 429 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 FAM169BQ8N8A8 192 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 DNAJA4Q8WW22 397 aaPredicted RBP10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 SLC38A4Q969I6 547 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 KTI12Q96EK9 354 aaPredicted RBP10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 KCNK17Q96T54 332 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 PTDSS2Q9BVG9 487 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 CA10Q9NS85 328 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 SELENONQ9NZV5 590 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 CRNNQ9UBG3 495 aaPredicted RBP10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 FBXO9Q9UK97 447 aaPredicted RBP10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 CDC42EP3Q9UKI2 254 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 CSPG4Q6UVK1 2322 aa10.51□□□□□ -0.73
PDLIM7-214ENST00000505746 A0A096LPE4 126 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 LOC102725191A0A1B0GVB3 256 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 A0A1W2PPZ6 126 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 PRORSD1PA6NEY8 169 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 B9A039 149 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 NDUFS8O00217 210 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 NR5A2O00482 541 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 SHOX2O60902 331 aaPredicted RBP10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 FZD7O75084 574 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 PDE5AO76074 875 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 ARAFP10398 606 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 HOXB9P17482 250 aaPredicted RBP10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 PDLIM4P50479 330 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 NCALDP61601 193 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 LSM11P83369 360 aaKnown RBP eCLIP10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 CDK6Q00534 326 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 IL1RL1Q01638 556 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 NAAAQ02083 359 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 MFSD13AQ14CX5 517 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 ALG10BQ5I7T1 473 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 LRIF1Q5T3J3 769 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 FAM91A1Q658Y4 838 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 ULK3Q6PHR2 472 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 DHRS4L2Q6PKH6 230 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 H1FNTQ75WM6 255 aaPredicted RBP10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 LINGO2Q7L985 606 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 CCDC36Q8IYA8 594 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 PIK3C3Q8NEB9 887 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 BHLHE22Q8NFJ8 381 aaPredicted RBP10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 OR4F15Q8NGB8 312 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 NFKBIDQ8NI38 313 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 LRRC8CQ8TDW0 803 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 NANOS1Q8WY41 292 aaKnown RBP10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 TAAR8Q969N4 342 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 SPDL1Q96EA4 605 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 SLC47A1Q96FL8 570 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 CCDC28BQ9BUN5 200 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 EVA1AQ9H8M9 152 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 TMEM160Q9NX00 188 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 SLC25A37Q9NYZ2 338 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 CCDC167Q9P0B6 97 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 CORO2BQ9UQ03 480 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 GMEB1Q9Y692 573 aa10.5□□□□□ -0.73
PDLIM7-214ENST00000505746 ZANQ9Y493 2812 aa10.49□□□□□ -0.73
PDLIM7-214ENST00000505746 TRAV36DV7A0A075B6V5 113 aa10.49□□□□□ -0.73
PDLIM7-214ENST00000505746 A0A1B0GWA3 101 aa10.49□□□□□ -0.73
PDLIM7-214ENST00000505746 EVPLLA8MZ36 301 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms