RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TMBIM4Q9HC24 238 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 THUMPD1Q9NXG2 353 aaKnown RBP4.56□□□□□ -1.68
NIPBL-204ENST00000504430 SLC22A7Q9Y694 548 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 ADGRL3Q9HAR2 1447 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 TGIF2-C20orf24A0A0A6YYL0 155 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 PDHXO00330 501 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 PRRG2O14669 202 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 NDUFA2O43678 99 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 KHDRBS3O75525 346 aaKnown RBP4.56□□□□□ -1.68
NIPBL-204ENST00000504430 APRTP07741 180 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 ICAM2P13598 275 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 ABOP16442 354 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 CHRNB2P17787 502 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 RAP1GDS1P52306 607 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 PLA2G4DQ86XP0 818 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 NAXDQ8IW45 347 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 NRMQ8IXM6 262 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 NANOGP1Q8N7R0 232 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 CCDC71LQ8N9Z2 235 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 RNF149Q8NC42 400 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 OR52H1Q8NGJ2 320 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 CDS1Q92903 461 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 MYLPFQ96A32 169 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 UGT2B28Q9BY64 529 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 BARHL1Q9BZE3 327 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 SHARPINQ9H0F6 387 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 TRABDQ9H4I3 376 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 KLHL31Q9H511 634 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 ZNF446Q9NWS9 450 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 FADS3Q9Y5Q0 445 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 ADGRA3Q8IWK6 1321 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 SMIM23A6NLE4 172 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 CENPXA8MT69 81 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 ETV2O00321 342 aaPredicted RBP4.55□□□□□ -1.68
NIPBL-204ENST00000504430 NUPL2O15504 423 aaKnown RBP4.55□□□□□ -1.68
NIPBL-204ENST00000504430 TAPBPO15533 448 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 PI15O43692 258 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 MPZL2O60487 215 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 BTDP43251 543 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 PAX2Q02962 417 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 RGS1Q08116 209 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 HACD2Q6Y1H2 254 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 PRSS48Q7RTY5 328 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 OR5B17Q8NGF7 314 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 NTNG2Q96CW9 530 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 MAP6D1Q9H9H5 199 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 SH2D2AQ9NP31 389 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 SLC7A7Q9UM01 511 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.55□□□□□ -1.68
NIPBL-204ENST00000504430 SAGE2PA6NJ88 616 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 PRKNO60260 465 aaPredicted RBP4.55□□□□□ -1.68
NIPBL-204ENST00000504430 MED6O75586 246 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 EIF3GO75821 320 aaKnown RBP eCLIP4.55□□□□□ -1.68
NIPBL-204ENST00000504430 TNNC2P02585 160 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 C21orf33P30042 268 aaPredicted RBP4.55□□□□□ -1.68
NIPBL-204ENST00000504430 CRYBA4P53673 196 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 GGTLC2Q14390 218 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 TRIP6Q15654 476 aaKnown RBP4.55□□□□□ -1.68
NIPBL-204ENST00000504430 WDR25Q64LD2 544 aaPredicted RBP4.55□□□□□ -1.68
NIPBL-204ENST00000504430 SAXO2Q658L1 398 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 ZNF787Q6DD87 383 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 CCDC112Q8NEF3 446 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 FNDC8Q8TC99 324 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 ACTR3CQ9C0K3 210 aaPredicted RBP4.55□□□□□ -1.68
NIPBL-204ENST00000504430 IL1RAPQ9NPH3 570 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 GPATCH2LQ9NWQ4 482 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 GUCA1BQ9UMX6 200 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 STUB1Q9UNE7 303 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 CNTNAP1P78357 1384 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 TRAV8-7A0A075B6U6 113 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.55□□□□□ -1.68
NIPBL-204ENST00000504430 hCG_38984A0A1B0GV85 526 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 TMX2-CTNND1H3BSU7 103 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 ARPC5O15511 151 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 P2RX6O15547 441 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 SPINK2P20155 84 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 SSTR2P30874 369 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 KIR2DS4P43632 304 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 CNTN1Q12860 1018 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 UBE2V2Q15819 145 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 GUK1Q16774 197 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 ODF4Q2M2E3 257 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 Q6ZRG5 221 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 Q6ZSR9 355 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 SLC39A11Q8N1S5 342 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 TMEM251Q8N6I4 163 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 TPRX1Q8N7U7 411 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 OR4D9Q8NGE8 314 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 OR1S2Q8NGQ3 325 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 JSRP1Q96MG2 331 aaPredicted RBP4.55□□□□□ -1.68
NIPBL-204ENST00000504430 P2RX4Q99571 388 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 DOK1Q99704 481 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 MAP3K3Q99759 626 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 COPS4Q9BT78 406 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 ULBP1Q9BZM6 244 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 CMTM6Q9NX76 183 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 GHRLQ9UBU3 117 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 KCNG2Q9UJ96 466 aa4.55□□□□□ -1.68
NIPBL-204ENST00000504430 PSMB11A5LHX3 300 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 TMEM150BA6NC51 233 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms