RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CPQQ9Y646 472 aa4.13□□□□□ -1.75
SSR3-209ENST00000498205 DENND4CQ5VZ89 1909 aa4.13□□□□□ -1.75
SSR3-209ENST00000498205 A0A075B6Q4 140 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 A0A1B0GU03 582 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 H0Y626 953 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 PSMD11O00231 422 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 FOXE1O00358 373 aaPredicted RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 CCL22O00626 93 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 RFXANKO14593 260 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 GNGT2O14610 69 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 OR1I1O60431 355 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 E2F6O75461 281 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 PSIP1O75475 530 aaKnown RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 ZFAND5O76080 213 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 SLC25A14O95258 325 aaPredicted RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 TRIM16O95361 564 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 IFNA14P01570 189 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 C9P02748 559 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 FABP3P05413 133 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 HIST1H2AGP0C0S8 130 aaPredicted RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 OR4Q2P0C623 313 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 TRAPPC2P0DI81 140 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 TRAPPC2BP0DI82 140 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 GP1BBP13224 206 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 NCK1P16333 377 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 SDC1P18827 310 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 TSPAN8P19075 237 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 EPORP19235 508 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 IL11P20809 199 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 HOXD10P28358 340 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 SERPINB1P30740 379 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 POLR2IP36954 125 aaKnown RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 CLK1P49759 484 aaKnown RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 ARFIP1P53367 373 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 MAPK12P53778 367 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 ATXN3P54252 364 aaPredicted RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 PRMT2P55345 433 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 MTPNP58546 118 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 RPS24P62847 133 aaKnown RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 BCL2L1Q07817 233 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 FCHO2Q0JRZ9 810 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 NPRL3Q12980 569 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 PDE7AQ13946 482 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 SELPLGQ14242 412 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 MAD2L1BPQ15013 274 aaPredicted RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 NEDD8Q15843 81 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 NDUFA5Q16718 116 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 IMPG1Q17R60 797 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 TRIM16LQ309B1 348 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 HLA-BQ31612 363 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 SLC25A30Q5SVS4 291 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 MFSD4BQ5TF39 518 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 SPESP1Q6UW49 350 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 SUSD1Q6UWL2 747 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 PLEKHG7Q6ZR37 379 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 IFNEQ86WN2 208 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 KRTAP7-1Q8IUC3 87 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 ZDHHC21Q8IVQ6 265 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 OFCC1Q8IZS5 231 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 LIX1Q8N485 282 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 LINC00471Q8N535 108 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 KBTBD8Q8NFY9 601 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 OR2AP1Q8NGE2 309 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 MCOLN3Q8TDD5 553 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 ASZ1Q8WWH4 475 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 EXT2Q93063 718 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 MYDGFQ969H8 173 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 SLC38A4Q969I6 547 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 FAM162AQ96A26 154 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 C7orf34Q96L11 122 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 LRRC3BQ96PB8 259 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 VPS35Q96QK1 796 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 CCDC32Q9BV29 185 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 CDCA4Q9BXL8 241 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 SLIRPQ9GZT3 109 aaKnown RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 ELOVL6Q9H5J4 265 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 IKZF5Q9H5V7 419 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 ASB8Q9H765 288 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 ACOT13Q9NPJ3 140 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 DNAJC11Q9NVH1 559 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 THUMPD1Q9NXG2 353 aaKnown RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 VPS29Q9UBQ0 182 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 GIMAP2Q9UG22 337 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 ATP6V1HQ9UI12 483 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 CRLS1Q9UJA2 301 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 LSM7Q9UK45 103 aaKnown RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 ZNF490Q9ULM2 529 aaPredicted RBP4.12□□□□□ -1.75
SSR3-209ENST00000498205 CFL2Q9Y281 166 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 TRAPPC4Q9Y296 219 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 POFUT2Q9Y2G5 429 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 ANGPTL3Q9Y5C1 460 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 DOCK6Q96HP0 2047 aa4.12□□□□□ -1.75
SSR3-209ENST00000498205 PLXNB3Q9ULL4 1909 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 NUP214P35658 2090 aaPredicted RBP4.11□□□□□ -1.75
SSR3-209ENST00000498205 C1orf232A0A0U1RR37 186 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 EFCAB10A6NFE3 127 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 LOC730098B7Z3J9 87 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 H7C423 109 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 M0R3G1 203 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 CLDN4O14493 209 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms