RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 OTUD3Q5T2D3 398 aaPredicted RBP16.2■□□□□ 0.18
PRKCB-209ENST00000498058 C6orf52Q5T4I8 152 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 C16orf89Q6UX73 402 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 DLEU7Q6UYE1 221 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 PHC2Q8IXK0 858 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 OR9K2Q8NGE7 335 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 PMM1Q92871 262 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 TMEM45BQ96B21 275 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 TNFRSF13CQ96RJ3 184 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 NAA11Q9BSU3 229 aaPredicted RBP16.2■□□□□ 0.18
PRKCB-209ENST00000498058 TPT1P8Q9HAU6 139 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 DSPPQ9NZW4 1301 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 CDHR4A6H8M9 788 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 CLIC1O00299 241 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 DBIP07108 87 aaKnown RBP16.19■□□□□ 0.18
PRKCB-209ENST00000498058 LOXL1Q08397 574 aaPredicted RBP16.19■□□□□ 0.18
PRKCB-209ENST00000498058 RAB35Q15286 201 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 OR7A5Q15622 319 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 HIKESHIQ53FT3 197 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 ZNF544Q6NX49 715 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 LINGO2Q7L985 606 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 CLIP4Q8N3C7 705 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 C17orf78Q8N4C9 275 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 C1orf162Q8NEQ5 155 aaPredicted RBP16.19■□□□□ 0.18
PRKCB-209ENST00000498058 OR8J3Q8NGG0 315 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 C10orf105Q8TEF2 133 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 REPIN1Q9BWE0 567 aaKnown RBP16.19■□□□□ 0.18
PRKCB-209ENST00000498058 THUMPD1Q9NXG2 353 aaKnown RBP16.19■□□□□ 0.18
PRKCB-209ENST00000498058 MOKQ9UQ07 419 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 AMDHD2Q9Y303 409 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 GMEB1Q9Y692 573 aa16.19■□□□□ 0.18
PRKCB-209ENST00000498058 AQP7P3A6NL99 342 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 B2RBV5 119 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 ETFAP13804 333 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 CDH2P19022 906 aaPredicted RBP16.18■□□□□ 0.18
PRKCB-209ENST00000498058 MPGP29372 298 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 VLDLRP98155 873 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 BNIP1Q12981 228 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 RUNDC3AQ59EK9 446 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 RPS26P11Q5JNZ5 115 aaPredicted RBP16.18■□□□□ 0.18
PRKCB-209ENST00000498058 CLEC2AQ6UVW9 174 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 AAED1Q7RTV5 226 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 OR52P1PQ8NH57 321 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 AURKBQ96GD4 344 aaPredicted RBP16.18■□□□□ 0.18
PRKCB-209ENST00000498058 ANKRD27Q96NW4 1050 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 RSPO3Q9BXY4 272 aaPredicted RBP16.18■□□□□ 0.18
PRKCB-209ENST00000498058 PARPBPQ9NWS1 579 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 VAPAQ9P0L0 249 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 SLAMF8Q9P0V8 285 aa16.18■□□□□ 0.18
PRKCB-209ENST00000498058 TRBV5-3A0A0A0MS03 114 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 RNF212BA8MTL3 300 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 HOXB9P17482 250 aaPredicted RBP16.17■□□□□ 0.18
PRKCB-209ENST00000498058 APOBEC3AP31941 199 aaPredicted RBP16.17■□□□□ 0.18
PRKCB-209ENST00000498058 DSCR9P59020 149 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 FADDQ13158 208 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 SWI5Q1ZZU3 235 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 CHRFAM7AQ494W8 412 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 PODNL1Q6PEZ8 512 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 MSRB3Q8IXL7 192 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 PEX5LQ8IYB4 626 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 DEPDC4Q8N2C3 294 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 CADM2Q8N3J6 435 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 BOD1Q96IK1 185 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 SF3B5Q9BWJ5 86 aaKnown RBP16.17■□□□□ 0.18
PRKCB-209ENST00000498058 C1orf21Q9H246 121 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 SLC25A37Q9NYZ2 338 aa16.17■□□□□ 0.18
PRKCB-209ENST00000498058 IGHV1-18A0A0C4DH31 117 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 TMEM247A6NEH6 219 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 FRS3O43559 492 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 NPIPB7O75200 414 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 LGI1O95970 557 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 BCHEP06276 602 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 GPIP06744 558 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 TFPTP0C1Z6 253 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 T-ENOLP0DO92 83 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 IGHV4-31P0DP07 118 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 SLC25A16P16260 332 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 CXCR1P25024 350 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 CRATP43155 626 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 SELENOPP49908 381 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 MAP2K6P52564 334 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 EFNA4P52798 201 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 PRPS1P60891 318 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 PSME3P61289 254 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 NANOGP8Q6NSW7 305 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 GPAT4Q86UL3 456 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 EPHX4Q8IUS5 362 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 PGAM4Q8N0Y7 254 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 SLC38A5Q8WUX1 472 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 FAM168AQ92567 244 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 ECSITQ9BQ95 431 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 CPPED1Q9BRF8 314 aaPredicted RBP16.16■□□□□ 0.18
PRKCB-209ENST00000498058 NELFAQ9H3P2 528 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 NANOGQ9H9S0 305 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 SEC61A2Q9H9S3 476 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 FKRPQ9H9S5 495 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 SPAG4Q9NPE6 437 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 ADPRHL2Q9NX46 363 aa16.16■□□□□ 0.18
PRKCB-209ENST00000498058 ZNF443Q9Y2A4 671 aaPredicted RBP16.16■□□□□ 0.18
PRKCB-209ENST00000498058 TMEM229AB2RXF0 380 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms