RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 NFKBIDQ8NI38 313 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 MAL2Q969L2 176 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 ZHX1-C8orf76Q96EF9 292 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 TMEM19Q96HH6 336 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 ARL5BQ96KC2 179 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 ADI1Q9BV57 179 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 GABARAPL1Q9H0R8 117 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 BCL2L10Q9HD36 194 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 ZNF443Q9Y2A4 671 aaPredicted RBP11.71□□□□□ -0.53
ERCC3-209ENST00000494464 AKAP6Q13023 2319 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 HIVEP1P15822 2718 aa11.71□□□□□ -0.54
ERCC3-209ENST00000494464 IGKV3D-15A0A087WSY6 115 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 TMED7-TICAM2A0A0A6YYA0 188 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 TMEM229AB2RXF0 380 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 G3V2T6 193 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 H0YAE9 185 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 GNGT2O14610 69 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 ZNF208O43345 1280 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 THBDP07204 575 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 TFPIP10646 304 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 KLK2P20151 261 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 LOXP28300 417 aaPredicted RBP11.7□□□□□ -0.54
ERCC3-209ENST00000494464 OR3A2P47893 321 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 SELENOWP63302 87 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 PPP2R2BQ00005 443 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 KEAP1Q14145 624 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 LARS2Q15031 903 aaKnown RBP11.7□□□□□ -0.54
ERCC3-209ENST00000494464 SLC36A3Q495N2 470 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 RPS26P11Q5JNZ5 115 aaPredicted RBP11.7□□□□□ -0.54
ERCC3-209ENST00000494464 SHQ1Q6PI26 577 aaKnown RBP11.7□□□□□ -0.54
ERCC3-209ENST00000494464 VRK2Q86Y07 508 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 HIPK1Q86Z02 1210 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 STEAP2Q8NFT2 490 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 LZICQ8WZA0 190 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 SLC35B4Q969S0 331 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 PIK3IP1Q96FE7 263 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 ZC3HAV1LQ96H79 300 aaKnown RBP11.7□□□□□ -0.54
ERCC3-209ENST00000494464 HDHD5Q9BXW7 423 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 ACTR6Q9GZN1 396 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 ZNF696Q9H7X3 374 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 CACYBPQ9HB71 228 aaKnown RBP11.7□□□□□ -0.54
ERCC3-209ENST00000494464 EMC3Q9P0I2 261 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 OSGIN1Q9UJX0 560 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 TRAPPC4Q9Y296 219 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 TMED7Q9Y3B3 224 aa11.7□□□□□ -0.54
ERCC3-209ENST00000494464 ZNF716A6NP11 495 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 TNFAIP8O95379 198 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 CNOT4O95628 575 aaKnown RBP11.69□□□□□ -0.54
ERCC3-209ENST00000494464 ALPLP05186 524 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 MYF6P23409 242 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 TACR3P29371 465 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 SLC16A1P53985 500 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 P2RY6Q15077 328 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 DEFB113Q30KQ7 82 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 IQCCQ4KMZ1 466 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 IFI44LQ53G44 452 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 BEX5Q5H9J7 111 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 ANKRD34AQ69YU3 496 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 OR2T5Q6IEZ7 315 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 REEP3Q6NUK4 255 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 TMEM154Q6P9G4 183 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 Q6ZT83 130 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 VTCN1Q7Z7D3 282 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 CXorf67Q86X51 503 aaPredicted RBP11.69□□□□□ -0.54
ERCC3-209ENST00000494464 ARMC8Q8IUR7 673 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 OR2T29Q8NH02 315 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 BBS10Q8TAM1 723 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 PIGXQ8TBF5 258 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 TAMM41Q96BW9 452 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 DDIT4LQ96D03 193 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 NRBF2Q96F24 287 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 C7orf34Q96L11 122 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 CNBD2Q96M20 576 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 ZNF300Q96RE9 604 aaPredicted RBP11.69□□□□□ -0.54
ERCC3-209ENST00000494464 RBM4BQ9BQ04 359 aaKnown RBP11.69□□□□□ -0.54
ERCC3-209ENST00000494464 USB1Q9BQ65 265 aaKnown RBP11.69□□□□□ -0.54
ERCC3-209ENST00000494464 RBM4Q9BWF3 364 aaKnown RBP11.69□□□□□ -0.54
ERCC3-209ENST00000494464 OR11A1Q9GZK7 315 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 ADAM19Q9H013 955 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 ARMC7Q9H6L4 198 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 RLIMQ9NVW2 624 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 UBAP1Q9NZ09 502 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 BAG5Q9UL15 447 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 IFT52Q9Y366 437 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 CHST2Q9Y4C5 530 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 FREM1Q5H8C1 2179 aa11.69□□□□□ -0.54
ERCC3-209ENST00000494464 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.68□□□□□ -0.54
ERCC3-209ENST00000494464 TMEM72A0PK05 275 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 C5orf58C9J3I9 102 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 ETS2P15036 469 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 CD53P19397 219 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 FPR1P21462 350 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 AQP1P29972 269 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 CAPGP40121 348 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 ACAA2P42765 397 aaKnown RBP11.68□□□□□ -0.54
ERCC3-209ENST00000494464 NR1H2P55055 460 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 H3F3AP84243 136 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 VLDLRP98155 873 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 GK3PQ14409 553 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 RFX4Q33E94 735 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms