RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 GLIPR1L2Q4G1C9 344 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 FAM98BQ52LJ0 330 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 CLEC9AQ6UXN8 241 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 DEF8Q6ZN54 512 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 TMPPEQ6ZT21 453 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 P3H2Q8IVL5 708 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 CDK20Q8IZL9 346 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 LRRC75A-AS1Q8N1F1 130 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 OR6T1Q8NGN1 323 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 OR2V1Q8NHB1 315 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 STK35Q8TDR2 534 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 ADAMTS16Q8TE57 1224 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 IGFBPL1Q8WX77 278 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 ROBO4Q8WZ75 1007 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 SLC38A4Q969I6 547 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 CPNE4Q96A23 557 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 GMPPAQ96IJ6 420 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 COX4I2Q96KJ9 171 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 Q96MF0 132 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 OR5B2Q96R09 309 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 USB1Q9BQ65 265 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 TACO1Q9BSH4 297 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 C12orf49Q9H741 205 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 YY1AP1Q9H869 796 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 PLSCR4Q9NRQ2 329 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 ROS1P08922 2347 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 COL6A5A8TX70 2615 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 A0A087WUJ7 227 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 A0A1B0GWA3 101 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 AQP12BA6NM10 295 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 CPSF4LA6NMK7 179 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 KIAA1324LA8MWY0 1029 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 ARPC2O15144 300 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 DNPH1O43598 174 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 EIF1BO60739 113 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 BCAS1O75363 584 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 PDE5AO76074 875 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 LY6G6DO95868 133 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 HIST1H2ABP04908 130 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 GPIP06744 558 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 PRG2P13727 222 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 GTF2E2P29084 291 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 SLC35A1P78382 337 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 RIPK1Q13546 671 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 MFSD13AQ14CX5 517 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 TSC22D1Q15714 1073 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 NPTX1Q15818 432 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 SYT14P1Q58G82 188 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 ZFP1Q6P2D0 407 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 BEND4Q6ZU67 534 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 HIST3H2AQ7L7L0 130 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 CXXC5Q7LFL8 322 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 SSX8Q7RTT4 187 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 ATG4DQ86TL0 474 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 AQP12AQ8IXF9 295 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 SLC43A2Q8N370 569 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 ABHD3Q8WU67 409 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 HIST1H2ACQ93077 130 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 HSH2DQ96JZ2 352 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 ZNF347Q96SE7 839 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 OR10A4Q9H209 315 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 COQ10BQ9H8M1 238 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 NGBQ9NPG2 151 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 KRCC1Q9NPI7 259 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 RIMS3Q9UJD0 308 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 CR1P17927 2039 aa9.78□□□□□ -0.84
TMEM39A-211ENST00000491685 FBN1P35555 2871 aaKnown RBP9.77□□□□□ -0.84
TMEM39A-211ENST00000491685 SMAD7O15105 426 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 CHP2O43745 196 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 ADAM11O75078 769 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 OR5F1O95221 314 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 AHSA1O95433 338 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 PMS2P2O95744 297 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 RHCEP18577 417 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 ENPP1P22413 925 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 IDUAP35475 653 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 PTH2RP49190 550 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 CDH12P55289 794 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 OR2B6P58173 313 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 ACTR3P61158 418 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 PIN1Q13526 163 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 TRAM2Q15035 370 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 RNPS1Q15287 305 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 TAF11Q15544 211 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 ZNF239Q16600 458 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 BEX5Q5H9J7 111 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 TMEM225Q6GV28 225 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 LCN8Q6JVE9 175 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 CYP2R1Q6VVX0 501 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 ZNF704Q6ZNC4 412 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 NUFIP2Q7Z417 695 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 WFDC8Q8IUA0 241 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 C10orf53Q8N6V4 93 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 RNF128Q8TEB7 428 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 C3orf49Q96BT1 292 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 CCDC124Q96CT7 223 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 DUS3LQ96G46 650 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 SLC41A3Q96GZ6 507 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 HDHD5Q9BXW7 423 aa9.77□□□□□ -0.85
TMEM39A-211ENST00000491685 AMBRA1Q9C0C7 1298 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms