RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 TGM7Q96PF1 710 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 IL4I1Q96RQ9 567 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 SLC30A2Q9BRI3 323 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 ANKRD60Q9BZ19 345 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 ROGDIQ9GZN7 287 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 IL22Q9GZX6 179 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 FBXO44Q9H4M3 255 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 CAB39LQ9H9S4 337 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 TUBG2Q9NRH3 451 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 SMOXQ9NWM0 555 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 MRPL39Q9NYK5 338 aaKnown RBP3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 OR1A1Q9P1Q5 309 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 SPRR3Q9UBC9 169 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 MTRF1LQ9UGC7 380 aaKnown RBP3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 PPIAL4EA0A075B759 164 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 A0A1W2PPV4 95 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 RSPH10B2B2RC85 870 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 B4DXG7 233 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 NBR2O15453 112 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 CRTAPO75718 401 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 H6PDO95479 791 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 SNAI1O95863 264 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 CRYGBP07316 175 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 CLTAP09496 248 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 RSPH10BP0C881 870 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 HSMCR30P0CW71 290 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 PPIAL4FP0DN26 164 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 PRPS2P11908 318 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 NCK1P16333 377 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 MGMTP16455 207 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 ELK1P19419 428 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 SERPINA2P20848 420 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 GABRR1P24046 479 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 LAP3P28838 519 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 SPAM1P38567 509 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 MAGEA5P43359 124 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 PRRC2AP48634 2157 aaKnown RBP3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 EFNA3P52797 238 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 PLTPP55058 493 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 CDH6P55285 790 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 MRPS11P82912 194 aaKnown RBP3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 ZNF45Q02386 682 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 SLAQ13239 276 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 USF2Q15853 346 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 LINC01620Q4KN68 170 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 PDZK1Q5T2W1 519 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 PVRIGQ6DKI7 326 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 SLC25A25Q6KCM7 469 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 TRMT10CQ7L0Y3 403 aaKnown RBP3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 KIAA1328Q86T90 577 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 KRTAP11-1Q8IUC1 163 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 STXBP6Q8NFX7 210 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR5AU1Q8NGC0 362 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 CNIH3Q8TBE1 160 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 SCFD1Q8WVM8 642 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 ST8SIA1Q92185 356 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 FRAT1Q92837 279 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 RAB1CQ92928 201 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 CIDECQ96AQ7 238 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 ZNF414Q96IQ9 312 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 AMDHD1Q96NU7 426 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 TGS1Q96RS0 853 aaKnown RBP3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 CYTH2Q99418 400 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 RIT2Q99578 217 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 COPS8Q99627 209 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 C20orf24Q9BUV8 137 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 ANKRA2Q9H9E1 313 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 IL26Q9NPH9 171 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 NANSQ9NR45 359 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 C20orf96Q9NUD7 363 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 IL20Q9NYY1 176 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 AHSPQ9NZD4 102 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 MTCH1Q9NZJ7 389 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 ZNF639Q9UID6 485 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 PITPNC1Q9UKF7 332 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 STAP1Q9ULZ2 295 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 TDRD6O60522 2096 aaKnown RBP3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 GAKO14976 1311 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 SH3TC1Q8TE82 1336 aa3.4□□□□□ -1.87
HMGB1P38-201ENST00000490557 EMC8O43402 210 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 N4BP1O75113 896 aaKnown RBP3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 IGLV1-47P01700 117 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 ERCC1P07992 297 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR8U8P0C7N1 319 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 POU2F1P14859 743 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 OTX1P32242 354 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 EPHX2P34913 555 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 GPR4P46093 362 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 PLA2G16P53816 162 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 RIPK4P57078 832 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 TIMM10P62072 90 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 BST2Q10589 180 aaKnown RBP3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 DPYSL3Q14195 570 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 GPR176Q14439 515 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 CHI3L2Q15782 390 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR4F3Q6IEY1 312 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 TTC23LQ6PF05 361 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 CXCL17Q6UXB2 119 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 ANKRD37Q7Z713 158 aa3.39□□□□□ -1.87
HMGB1P38-201ENST00000490557 ACOT1Q86TX2 421 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms