RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 C6orf136Q5SQH8 315 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 OR4F3Q6IEY1 312 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 SYT10Q6XYQ8 523 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 ZCCHC23Q6ZST2 131 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 KDM8Q8N371 416 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 RNF217Q8TC41 542 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 ZNF837Q96EG3 531 aaPredicted RBP13.87□□□□□ -0.19
USP48-210ENST00000489108 C3orf30Q96M34 536 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 TAPBPLQ9BX59 468 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 ZNF665Q9H7R5 613 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 UNKLQ9H9P5 680 aaKnown RBP13.87□□□□□ -0.19
USP48-210ENST00000489108 PSMC3IPQ9P2W1 217 aaPredicted RBP13.87□□□□□ -0.19
USP48-210ENST00000489108 A0A0G2JMP0 313 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 A0A0X1KG70 313 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 RPL36A-HNRNPH2H7BZ11 118 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 CHRM4P08173 479 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 FPR2P25090 351 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 ZFP36P26651 326 aaKnown RBP13.86□□□□□ -0.19
USP48-210ENST00000489108 CRHR1P34998 444 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 CAPZA2P47755 286 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 CCT5P48643 541 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 CLDN17P56750 224 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 REP15Q6BDI9 236 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 FNDC5Q8NAU1 212 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 OR4M2Q8NGB6 313 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 MS4A3Q96HJ5 214 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 DUX5Q96PT3 197 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 ZNF416Q9BWM5 594 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 NTN4Q9HB63 628 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 GPR35Q9HC97 309 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 MYEF2Q9P2K5 600 aaKnown RBP13.86□□□□□ -0.19
USP48-210ENST00000489108 FZR1Q9UM11 496 aa13.86□□□□□ -0.19
USP48-210ENST00000489108 CFAP73A6NFT4 308 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 J3QLI3 93 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 FAAHO00519 579 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 RIPK2O43353 540 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 ZNF432O94892 652 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 PRSS23O95084 383 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 NAT2P11245 290 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 GLRXP35754 106 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 MRPS11P82912 194 aaKnown RBP13.85□□□□□ -0.19
USP48-210ENST00000489108 MVKQ03426 396 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 CKAP4Q07065 602 aaKnown RBP13.85□□□□□ -0.19
USP48-210ENST00000489108 ZP4Q12836 540 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 EPS8Q12929 822 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 CEACAM16Q2WEN9 425 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 XKR7Q5GH72 579 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 AVPI1Q5T686 147 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 DCAF12L2Q5VW00 463 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 PRAMEF8Q5VWM4 474 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 PRAMEF7Q5VXH5 474 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 CMIPQ8IY22 773 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 ANKK1Q8NFD2 765 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 OR4A15Q8NGL6 344 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 KIF18AQ8NI77 898 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 AGR3Q8TD06 166 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 RASD1Q9Y272 281 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 CORINQ9Y5Q5 1042 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 NOX1Q9Y5S8 564 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 CMYA5Q8N3K9 4069 aa13.85□□□□□ -0.19
USP48-210ENST00000489108 CDC14BO60729 498 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 TRIM13O60858 407 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 DEAF1O75398 565 aaPredicted RBP13.84□□□□□ -0.19
USP48-210ENST00000489108 SEC14L2O76054 403 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 CPSF4O95639 269 aaKnown RBP13.84□□□□□ -0.19
USP48-210ENST00000489108 C1QCP02747 245 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 G6PDP11413 515 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 ZNF35P13682 527 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 SYPL1Q16563 259 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 GSTA3Q16772 222 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 CCDC36Q8IYA8 594 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 GPR137CQ8N3F9 429 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 SIGLECL1Q8N7X8 197 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 ANKFN1Q8N957 763 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 DVL3Q92997 716 aaPredicted RBP13.84□□□□□ -0.19
USP48-210ENST00000489108 C7orf69Q9H7B7 122 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 B3GNT2Q9NY97 397 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 OPN4Q9UHM6 478 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 DUSP13Q9UII6 198 aa13.84□□□□□ -0.19
USP48-210ENST00000489108 AGAP5A6NIR3 686 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 A8MVM7 634 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 RNASET2O00584 256 aaKnown RBP13.83□□□□□ -0.2
USP48-210ENST00000489108 FRS3O43559 492 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 SLC43A1O75387 559 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 FSHBP01225 129 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 HLA-HP01893 362 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 GKN3PP0CG01 181 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 UQCRBP14927 111 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 UQCRC2P22695 453 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 PRTN3P24158 256 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 MAGEB1P43366 347 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 CLDN8P56748 225 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 HPCAP84074 193 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 PIGFQ07326 219 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 PCLAFQ15004 111 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 TRMT5Q32P41 509 aaKnown RBP13.83□□□□□ -0.2
USP48-210ENST00000489108 ALKBH6Q3KRA9 238 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 MRPL2Q5T653 305 aaKnown RBP13.83□□□□□ -0.2
USP48-210ENST00000489108 C1orf140Q5VVS0 124 aa13.83□□□□□ -0.2
USP48-210ENST00000489108 SAXO2Q658L1 398 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms