RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 DBTP11182 482 aaKnown RBP17.47■□□□□ 0.39
CCM2-216ENST00000488727 SRD5A2P31213 254 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 GRK5P34947 590 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 CCR4P51679 360 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 DSCR4P56555 118 aaPredicted RBP17.47■□□□□ 0.39
CCM2-216ENST00000488727 RGS8P57771 180 aaPredicted RBP17.47■□□□□ 0.39
CCM2-216ENST00000488727 FOXK1P85037 733 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 SLC10A1Q14973 349 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 TOMM34Q15785 309 aaPredicted RBP17.47■□□□□ 0.39
CCM2-216ENST00000488727 TIMM50Q3ZCQ8 353 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 RASSF6Q6ZTQ3 369 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 YRDCQ86U90 279 aaKnown RBP17.47■□□□□ 0.39
CCM2-216ENST00000488727 KIF18BQ86Y91 864 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 CHPT1Q8WUD6 406 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 PPP1R14BQ96C90 147 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 GPR137Q96N19 417 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 MGLLQ99685 303 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 TAPBPLQ9BX59 468 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 TSSK6Q9BXA6 273 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 OR2B2Q9GZK3 357 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 SLC6A15Q9H2J7 730 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 EXOSC3Q9NQT5 275 aaKnown RBP17.47■□□□□ 0.39
CCM2-216ENST00000488727 PLSCR2Q9NRY7 297 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 TAS2R16Q9NYV7 291 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 DKKL1Q9UK85 242 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 ANKUB1A6NFN9 424 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 METTL15A6NJ78 407 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 ZIC3O60481 467 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 SULT1C4O75897 302 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 IGHG3P01860 377 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 TCEA1P23193 301 aaKnown RBP17.47■□□□□ 0.39
CCM2-216ENST00000488727 SUMO3P55854 103 aaPredicted RBP17.47■□□□□ 0.39
CCM2-216ENST00000488727 HSF1Q00613 529 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 WIPI1Q5MNZ9 446 aaPredicted RBP17.47■□□□□ 0.39
CCM2-216ENST00000488727 PLEKHM3Q6ZWE6 761 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 PRICKLE2Q7Z3G6 844 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 GRAMD2AQ8IUY3 354 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 IQCF1Q8N6M8 205 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 OR5W2Q8NH69 310 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 PIGXQ8TBF5 258 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 GPR119Q8TDV5 335 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 ACOT11Q8WXI4 607 aaPredicted RBP17.47■□□□□ 0.39
CCM2-216ENST00000488727 OR5M11Q96RB7 305 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 NPAS1Q99742 590 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 NXF2Q9GZY0 626 aaKnown RBP17.47■□□□□ 0.39
CCM2-216ENST00000488727 MMP27Q9H306 513 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 ACKR4Q9NPB9 350 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 CTPS2Q9NRF8 586 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 GALNT8Q9NY28 637 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 TVP23BQ9NYZ1 205 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 VDAC3Q9Y277 283 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 CPSF4LA6NMK7 179 aaKnown RBP17.46■□□□□ 0.39
CCM2-216ENST00000488727 CCRL2O00421 344 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 FRS3O43559 492 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 PRKYO43930 277 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 NUDT14O95848 222 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 GKN3PP0CG01 181 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 TGFBR1P36897 503 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 OMPP47874 163 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 TLE1Q04724 770 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 ACSM5Q6NUN0 579 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 ZNF730Q6ZMV8 503 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 TEX47Q8TBZ9 253 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 MCHR1Q99705 422 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 MED17Q9NVC6 651 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 TAS2R10Q9NYW0 307 aa17.46■□□□□ 0.39
CCM2-216ENST00000488727 RPH3AQ9Y2J0 694 aaPredicted RBP17.46■□□□□ 0.39
CCM2-216ENST00000488727 MRPS18CQ9Y3D5 142 aaKnown RBP17.46■□□□□ 0.39
CCM2-216ENST00000488727 hCG_2014768A0A024R1R8 64 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 ZNHIT1O43257 154 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 KLF4O43474 513 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 WISP1O95388 367 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 BMP4P12644 408 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 PRG2P13727 222 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 FPR3P25089 353 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 LSM11P83369 360 aaKnown RBP eCLIP17.45■□□□□ 0.38
CCM2-216ENST00000488727 MED22Q15528 200 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 PLPPR5Q32ZL2 321 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 ZNF404Q494X3 552 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 SYT14P1Q58G82 188 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 DCDC5Q6ZRR9 648 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 TRILQ7L0X0 811 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 ATCAYQ86WG3 371 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 OR14L1PQ8NHC6 308 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 MCFD2Q8NI22 146 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 OPALINQ96PE5 141 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 MND1Q9BWT6 205 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 PRRG3Q9BZD7 231 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 ARMC7Q9H6L4 198 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 MRPS18AQ9NVS2 196 aaKnown RBP17.45■□□□□ 0.38
CCM2-216ENST00000488727 ZGRF1Q86YA3 2104 aa17.45■□□□□ 0.38
CCM2-216ENST00000488727 IRGMA1A4Y4 181 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 SHISA8B8ZZ34 492 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 SCG5P05408 212 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 HK1P19367 917 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 ACAA2P42765 397 aaKnown RBP17.44■□□□□ 0.38
CCM2-216ENST00000488727 ZNF41P51814 821 aaPredicted RBP17.44■□□□□ 0.38
CCM2-216ENST00000488727 CBFBQ13951 182 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 TSTQ16762 297 aaKnown RBP17.44■□□□□ 0.38
CCM2-216ENST00000488727 ZSWIM7Q19AV6 140 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms