RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PTGES2Q9H7Z7 377 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 MRPL39Q9NYK5 338 aaKnown RBP8.52□□□□□ -1.05
SF3B1-211ENST00000487698 EXOSC1Q9Y3B2 195 aaKnown RBP8.52□□□□□ -1.05
SF3B1-211ENST00000487698 A0A087WZY1 265 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 OR6C68A6NDL8 312 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 MYL12BO14950 172 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 TRIM3O75382 744 aaPredicted RBP8.51□□□□□ -1.05
SF3B1-211ENST00000487698 SNX4O95219 450 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 SCG5P05408 212 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 MYL12AP19105 171 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 EIF1P41567 113 aaKnown RBP8.51□□□□□ -1.05
SF3B1-211ENST00000487698 RGS6P49758 472 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 GGTLC2Q14390 218 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 MFSD13AQ14CX5 517 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 SPHARQ15513 63 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 TGIF1Q15583 401 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 ARMCX4Q5H9R4 360 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 EMC4Q5J8M3 183 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 C3orf33Q6P1S2 294 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 B3GLCTQ6Y288 498 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 GTPBP8Q8N3Z3 284 aaPredicted RBP8.51□□□□□ -1.05
SF3B1-211ENST00000487698 PSD4Q8NDX1 1056 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 ZNF417Q8TAU3 575 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 ZPLD1Q8TCW7 415 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 SLC25A36Q96CQ1 311 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 DDIT4LQ96D03 193 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 DNAJA3Q96EY1 480 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 ZNF587Q96SQ5 575 aaPredicted RBP8.51□□□□□ -1.05
SF3B1-211ENST00000487698 NMNAT3Q96T66 252 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 ADGRL4Q9HBW9 690 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 DLL3Q9NYJ7 618 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 TNFRSF10DQ9UBN6 386 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 A0A0G2JMM0 328 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 A0A1W2PPB8 328 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 A0A1W2PPW3 197 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 A0A1W2PRS3 328 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 KIR3DP1A8MWS1 328 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 FAM47E-STBD1D6RA91 191 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 PLPP3O14495 311 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 IGHMP01871 453 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 GYPBP06028 91 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 LIPCP11150 499 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 IMPDH2P12268 514 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 CDKN2AP42771 156 aaKnown RBP8.51□□□□□ -1.05
SF3B1-211ENST00000487698 WNT4P56705 351 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 FOXK1P85037 733 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 NFATC3Q12968 1075 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 AIMP2Q13155 320 aaKnown RBP8.51□□□□□ -1.05
SF3B1-211ENST00000487698 SELENBP1Q13228 472 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 KLHL12Q53G59 568 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 MESTQ5EB52 335 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 TIGD3Q6B0B8 471 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 GPR139Q6DWJ6 353 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 ATCAYQ86WG3 371 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 EXD3Q8N9H8 876 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 SCAIQ8N9R8 606 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 OR51G2Q8NGK0 314 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 OR9Q1Q8NGQ5 310 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 KIAA1143Q96AT1 154 aaPredicted RBP8.51□□□□□ -1.05
SF3B1-211ENST00000487698 ASPNQ9BXN1 380 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 OR51V1Q9H2C8 321 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 ERVK13-1Q9NX77 482 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 ANKRD10Q9NXR5 420 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 CORINQ9Y5Q5 1042 aa8.51□□□□□ -1.05
SF3B1-211ENST00000487698 LIPT2A6NK58 231 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 G3V3Y1 287 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 SPI1P17947 270 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 NR4A1P22736 598 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 IDUAP35475 653 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 CD79BP40259 229 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 CYB561P49447 251 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 SLC25A1P53007 311 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 DSCR4P56555 118 aaPredicted RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 ZP4Q12836 540 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 MLLT11Q13015 90 aaPredicted RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 LSAMPQ13449 338 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 KRR1Q13601 381 aaKnown RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 C1DQ13901 141 aaKnown RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 SPCS2Q15005 226 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 SSX1Q16384 188 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 OR2G6Q5TZ20 316 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 TMEM99Q8N816 258 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 OR1J4Q8NGS1 313 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 ZNF519Q8TB69 540 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 SLC25A43Q8WUT9 341 aaPredicted RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 SERINC1Q9NRX5 453 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 INIPQ9NRY2 104 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 SACM1LQ9NTJ5 587 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 GRHPRQ9UBQ7 328 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 TEKT2Q9UIF3 430 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 PTPRZ1P23471 2315 aaPredicted RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 LRRC3CA6NJW4 275 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 H3BML4 177 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 CCRL2O00421 344 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 SLC30A4O14863 429 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 SLC22A1O15245 554 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 ZIC3O60481 467 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 P04436 131 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 SBK2P0C263 348 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 HSMCR30P0CW71 290 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms