RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 OR6C65A6NJZ3 312 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 VWC2LB2RUY7 222 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 ZNF432O94892 652 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 CSF3P09919 207 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 BMP2P12643 396 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 UBE2NP61088 152 aaKnown RBP10.61□□□□□ -0.71
VPS16-208ENST00000487461 LSM11P83369 360 aaKnown RBP eCLIP10.61□□□□□ -0.71
VPS16-208ENST00000487461 ARF1P84077 181 aaKnown RBP10.61□□□□□ -0.71
VPS16-208ENST00000487461 ROR2Q01974 943 aaKnown RBP10.61□□□□□ -0.71
VPS16-208ENST00000487461 NAAAQ02083 359 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 COMTD1Q86VU5 262 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 FUNDC1Q8IVP5 155 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 PHC2Q8IXK0 858 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 BBS10Q8TAM1 723 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 MAGEE2Q8TD90 523 aaPredicted RBP10.61□□□□□ -0.71
VPS16-208ENST00000487461 TAAR8Q969N4 342 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 SLC35B4Q969S0 331 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 OXGR1Q96P68 337 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 SORCS2Q96PQ0 1159 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 ALKBH3Q96Q83 286 aaPredicted RBP10.61□□□□□ -0.71
VPS16-208ENST00000487461 KATNB1Q9BVA0 655 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 PRR14Q9BWN1 585 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 LINC00470Q9BZP3 86 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 SEC61A2Q9H9S3 476 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 TMBIM4Q9HC24 238 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 CA10Q9NS85 328 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 TMEM160Q9NX00 188 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 SLC25A37Q9NYZ2 338 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 SLAMF8Q9P0V8 285 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 B3GAT1Q9P2W7 334 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 USH1CQ9Y6N9 552 aa10.61□□□□□ -0.71
VPS16-208ENST00000487461 IGKV1D-42A0A075B6H8 117 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 RPL36A-HNRNPH2H7BZ11 118 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 FZD7O75084 574 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 IGLV1-44P01699 117 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 CRYAAP02489 173 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 OR4A8P0C604 315 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 CECR9P0C854 216 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 FAM157CP0CG43 387 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 HOXB1P14653 301 aaPredicted RBP10.6□□□□□ -0.71
VPS16-208ENST00000487461 ZNF43P17038 809 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 PAX7P23759 505 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 HTR2AP28223 471 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 CALCRP30988 508 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 PDLIM4P50479 330 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 HGFACQ04756 655 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 FADDQ13158 208 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 ADIPOQQ15848 244 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 C6orf89Q6UWU4 347 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 MSRB3Q8IXL7 192 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 C10orf111Q8N326 155 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 ARIH2OSQ8N7S6 290 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 FAM169BQ8N8A8 192 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 LSMEM1Q8N8F7 131 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 ANKS4BQ8N8V4 417 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 NFKBIDQ8NI38 313 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 ZNF837Q96EG3 531 aaPredicted RBP10.6□□□□□ -0.71
VPS16-208ENST00000487461 FOXN4Q96NZ1 517 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 ZNF317Q96PQ6 595 aaPredicted RBP10.6□□□□□ -0.71
VPS16-208ENST00000487461 VRK1Q99986 396 aaPredicted RBP10.6□□□□□ -0.71
VPS16-208ENST00000487461 KCNS3Q9BQ31 491 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 REPIN1Q9BWE0 567 aaKnown RBP10.6□□□□□ -0.71
VPS16-208ENST00000487461 BEX2Q9BXY8 128 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 RAD21L1Q9H4I0 556 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 GPR35Q9HC97 309 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 RPS6KB2Q9UBS0 482 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 CDC42EP3Q9UKI2 254 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 MXRA5Q9NR99 2828 aa10.6□□□□□ -0.71
VPS16-208ENST00000487461 A0A1B0GWA3 101 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 B9A039 149 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 C5orf58C9J3I9 102 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 M0R082 166 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 TPST1O60507 370 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 SLC43A1O75387 559 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 IGKV3-15P01624 115 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 CELA3BP08861 270 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 ETS2P15036 469 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 CBR1P16152 277 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 ZNF16P17020 682 aaPredicted RBP10.59□□□□□ -0.71
VPS16-208ENST00000487461 CBLP22681 906 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 GRPRP30550 384 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 PRKAR1BP31321 381 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 NR4A2P43354 598 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 MRPL19P49406 292 aaKnown RBP10.59□□□□□ -0.71
VPS16-208ENST00000487461 IDH3AP50213 366 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 SNRPD2P62316 118 aaKnown RBP10.59□□□□□ -0.71
VPS16-208ENST00000487461 C1DQ13901 141 aaKnown RBP10.59□□□□□ -0.71
VPS16-208ENST00000487461 GGTLC2Q14390 218 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 C3orf36Q3SXR2 165 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 PAGE3Q5JUK9 113 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 LRIF1Q5T3J3 769 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 BLOC1S3Q6QNY0 202 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 VHLLQ6RSH7 139 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 MYPOPQ86VE0 399 aaPredicted RBP10.59□□□□□ -0.71
VPS16-208ENST00000487461 GOLGA6L1Q8N7Z2 621 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 ZNF417Q8TAU3 575 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 TMEM158Q8WZ71 300 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 ZNF587Q96SQ5 575 aaPredicted RBP10.59□□□□□ -0.71
VPS16-208ENST00000487461 PLK3Q9H4B4 646 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms