RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 FASTKD3Q14CZ7 662 aaKnown RBP3.35□□□□□ -1.87
PTCD3-216ENST00000487043 SLC1A5Q15758 541 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 MAJINQ3KP22 176 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 ANKRD55Q3KP44 614 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 ZFP69Q49AA0 526 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 HSP90B2PQ58FF3 399 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 CARD16Q5EG05 197 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 SPANXN3Q5MJ09 141 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 CEP85LQ5SZL2 805 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 STEAP4Q687X5 459 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 TMEM215Q68D42 235 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 ARHGAP11AQ6P4F7 1023 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 C22orf39Q6P5X5 142 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 CBLN3Q6UW01 205 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 C3P1Q6ZMU1 363 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 C18orf65Q6ZTR6 163 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 Q7L0L9 218 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 NOTCH2NLQ7Z3S9 236 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 OR4F17Q8NGA8 305 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 OR2AP1Q8NGE2 309 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 SLC25A36Q96CQ1 311 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 NSMCE3Q96MG7 304 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 RCHY1Q96PM5 261 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 OR4F4Q96R69 305 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 TRIB3Q96RU7 358 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 RANBP9Q96S59 729 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 CYTH2Q99418 400 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 APOL2Q9BQE5 337 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 TBCDQ9BTW9 1192 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 KIFC1Q9BW19 673 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 LIME1Q9H400 295 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 UBE2ZQ9H832 354 aaPredicted RBP3.35□□□□□ -1.87
PTCD3-216ENST00000487043 VPS37BQ9H9H4 285 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 Q9HAA7 133 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 TMBIM4Q9HC24 238 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 MRM3Q9HC36 420 aaKnown RBP3.35□□□□□ -1.87
PTCD3-216ENST00000487043 MED4Q9NPJ6 270 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 CHRAC1Q9NRG0 131 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 ELOVL2Q9NXB9 296 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.35□□□□□ -1.87
PTCD3-216ENST00000487043 RPL26L1Q9UNX3 145 aaKnown RBP3.35□□□□□ -1.87
PTCD3-216ENST00000487043 MAD1L1Q9Y6D9 718 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 TRIOBPQ9H2D6 2365 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 DENND4AQ7Z401 1863 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 KIF26AQ9ULI4 1882 aaPredicted RBP3.35□□□□□ -1.87
PTCD3-216ENST00000487043 LAMA3Q16787 3333 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 LOC105371242A0A075B767 164 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 A0A0A6YYD4 124 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 IGHV3-38A0A0C4DH36 116 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 TRBV5-4A0A0C4DH59 114 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 EXOC1LA0A1B0GW35 172 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 A0A1W2PQ67 120 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 HEATR9A2RTY3 570 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 GOLGA6L10A6NI86 522 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 FAM159BA6NKW6 160 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 A8MUI8 341 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 GOLGA8KD6RF30 607 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 NR5A2O00482 541 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 TRAFD1O14545 582 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 IMPA2O14732 288 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 TFECO14948 347 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 TBX19O60806 448 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 CDH16O75309 829 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 MTX2O75431 263 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 ECDO95905 644 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 IGLV1-44P01699 117 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 C1QAP02745 245 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 APODP05090 189 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 UGT2B4P06133 528 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 IVLP07476 585 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 OR9G9P0C7N8 305 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 FOSL2P15408 326 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 GCAP28676 217 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 STK19P49842 368 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 CCNHP51946 323 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 CRADDP78560 199 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 ACVR1Q04771 509 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 BNIP1Q12981 228 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 POU6F1Q14863 301 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 PDK4Q16654 411 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 KLHL38Q2WGJ6 581 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 KRT71Q3SY84 523 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 POM121L1PQ3SYA9 428 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 TNFAIP8L3Q5GJ75 292 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 CFAP157Q5JU67 520 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 ARMC12Q5T9G4 340 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 AGBL2Q5U5Z8 902 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 PDPK2PQ6A1A2 396 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 DMKNQ6E0U4 476 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 RHBDD2Q6NTF9 364 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 PNCKQ6P2M8 343 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 ZNF562Q6V9R5 426 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 NLRP9Q7RTR0 991 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 SLC26A11Q86WA9 606 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 LRRC6Q86X45 466 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 METTL4Q8N3J2 472 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 RIBC1Q8N443 379 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 DEFB123Q8N688 67 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 AQP11Q8NBQ7 271 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms