RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 GPATCH2Q9NW75 528 aa12.82□□□□□ -0.36
U2AF1-211ENST00000486519 GAR1Q9NY12 217 aaKnown RBP12.82□□□□□ -0.36
U2AF1-211ENST00000486519 TMED7Q9Y3B3 224 aa12.82□□□□□ -0.36
U2AF1-211ENST00000486519 AQP7P3A6NL99 342 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 SUPT7LO94864 414 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 IGHMP01871 453 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 RBP1P09455 135 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 RPS26P62854 115 aaKnown RBP12.81□□□□□ -0.36
U2AF1-211ENST00000486519 PIGFQ07326 219 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 OR7A5Q15622 319 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 TSTQ16762 297 aaKnown RBP12.81□□□□□ -0.36
U2AF1-211ENST00000486519 NKPD1Q17RQ9 610 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 PHYHD1Q5SRE7 291 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 CCDC91Q7Z6B0 441 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 ZFP28Q8NHY6 868 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 ADAMTS15Q8TE58 950 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 OR7D2Q96RA2 312 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 ACTRT3Q9BYD9 372 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 PRDM13Q9H4Q3 707 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 SH3BP4Q9P0V3 963 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 OSGIN1Q9UJX0 560 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 MKLN1Q9UL63 735 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 TMCO1Q9UM00 188 aa12.81□□□□□ -0.36
U2AF1-211ENST00000486519 LIPT2A6NK58 231 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 PIP5K1CO60331 668 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
U2AF1-211ENST00000486519 CLK1P49759 484 aaKnown RBP12.8□□□□□ -0.36
U2AF1-211ENST00000486519 SERPINB8P50452 374 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 PAX8Q06710 450 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 TP53BP2Q13625 1128 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 KIAA0040Q15053 153 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 UAP1Q16222 522 aaPredicted RBP12.8□□□□□ -0.36
U2AF1-211ENST00000486519 CEACAM16Q2WEN9 425 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 TMEM255AQ5JRV8 349 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 ZNF678Q5SXM1 525 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 GKAP1Q5VSY0 366 aaPredicted RBP12.8□□□□□ -0.36
U2AF1-211ENST00000486519 KDM8Q8N371 416 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 IL17RDQ8NFM7 739 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 ST7LQ8TDW4 575 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 RAB1CQ92928 201 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 PPCDCQ96CD2 204 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 MRI1Q9BV20 369 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 SF3B5Q9BWJ5 86 aaKnown RBP12.8□□□□□ -0.36
U2AF1-211ENST00000486519 LINC00470Q9BZP3 86 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 NMUR2Q9GZQ4 415 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 GPR35Q9HC97 309 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 TNFRSF12AQ9NP84 129 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 ZNF224Q9NZL3 707 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 BAIAP2L1Q9UHR4 511 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 JRKLQ9Y4A0 524 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 NOX1Q9Y5S8 564 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 HYDINQ4G0P3 5121 aa12.8□□□□□ -0.36
U2AF1-211ENST00000486519 SERTM1A2A2V5 107 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 ANKRD28O15084 1053 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 ZNF432O94892 652 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 MAGEA12P43365 314 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 IDH2P48735 452 aaKnown RBP12.79□□□□□ -0.36
U2AF1-211ENST00000486519 GLO1Q04760 184 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 PDE7AQ13946 482 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 PAQR4Q8N4S7 273 aaPredicted RBP12.79□□□□□ -0.36
U2AF1-211ENST00000486519 CCL17Q92583 94 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 ZDHHC16Q969W1 377 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 ITPKCQ96DU7 683 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 TSSK3Q96PN8 268 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 OR51B6Q9H340 312 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 REEP4Q9H6H4 257 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 MOV10Q9HCE1 1003 aaKnown RBP12.79□□□□□ -0.36
U2AF1-211ENST00000486519 NECAP2Q9NVZ3 263 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 ZNF346Q9UL40 294 aaKnown RBP12.79□□□□□ -0.36
U2AF1-211ENST00000486519 POLR3KQ9Y2Y1 108 aaPredicted RBP12.79□□□□□ -0.36
U2AF1-211ENST00000486519 CCL27Q9Y4X3 112 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 DSPPQ9NZW4 1301 aa12.79□□□□□ -0.36
U2AF1-211ENST00000486519 RPL36A-HNRNPH2H7BZ11 118 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 MPIG6BO95866 241 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 FAM157BP0CG42 384 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 CD79AP11912 226 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 TACR3P29371 465 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 SH3BGRP55822 239 aaPredicted RBP12.78□□□□□ -0.36
U2AF1-211ENST00000486519 COL10A1Q03692 680 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 DBPQ10586 325 aaPredicted RBP12.78□□□□□ -0.36
U2AF1-211ENST00000486519 LCP2Q13094 533 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 TRMT5Q32P41 509 aaKnown RBP12.78□□□□□ -0.36
U2AF1-211ENST00000486519 TMEM154Q6P9G4 183 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 Q6YL49 198 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 OR10S1Q8NGN2 331 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 OR5AK3PQ8NH89 298 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 ZG16BQ96DA0 208 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 TIMD4Q96H15 378 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 DPH5Q9H2P9 285 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 PCDHGB4Q9UN71 923 aa12.78□□□□□ -0.36
U2AF1-211ENST00000486519 FAM187AA6NFU0 413 aa12.77□□□□□ -0.37
U2AF1-211ENST00000486519 K7EIL1 84 aa12.77□□□□□ -0.37
U2AF1-211ENST00000486519 TPD52L2O43399 206 aaKnown RBP12.77□□□□□ -0.37
U2AF1-211ENST00000486519 TBX19O60806 448 aa12.77□□□□□ -0.37
U2AF1-211ENST00000486519 UBOX5O94941 541 aa12.77□□□□□ -0.37
U2AF1-211ENST00000486519 MELTFP08582 738 aa12.77□□□□□ -0.37
U2AF1-211ENST00000486519 GSTA2P09210 222 aa12.77□□□□□ -0.37
U2AF1-211ENST00000486519 SDC1P18827 310 aa12.77□□□□□ -0.37
U2AF1-211ENST00000486519 CLDN17P56750 224 aa12.77□□□□□ -0.37
U2AF1-211ENST00000486519 PAX2Q02962 417 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms