RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 C9orf135Q5VTT2 229 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 ERICH5Q6P6B1 374 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 KLHL24Q6TFL4 600 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 SEZ6L2Q6UXD5 910 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 TMEM108Q6UXF1 575 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 H1FNTQ75WM6 255 aaPredicted RBP12.21□□□□□ -0.45
VARS-225ENST00000482996 CCDC80Q76M96 950 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 CALHM3Q86XJ0 350 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 EPHX4Q8IUS5 362 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 C17orf78Q8N4C9 275 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 GPR32P1Q8NGA4 272 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 ZNF417Q8TAU3 575 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 C10orf82Q8WW14 230 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 FBXW5Q969U6 566 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 TAMM41Q96BW9 452 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 OXGR1Q96P68 337 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 ZNF317Q96PQ6 595 aaPredicted RBP12.21□□□□□ -0.45
VARS-225ENST00000482996 CCT8L2Q96SF2 557 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 ZNF587Q96SQ5 575 aaPredicted RBP12.21□□□□□ -0.45
VARS-225ENST00000482996 WFDC6Q9BQY6 131 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 TMEM43Q9BTV4 400 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 AMBRA1Q9C0C7 1298 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 AMDHD2Q9Y303 409 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 CORINQ9Y5Q5 1042 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 MAGED1Q9Y5V3 778 aaPredicted RBP12.21□□□□□ -0.45
VARS-225ENST00000482996 SLC25A15Q9Y619 301 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 AKAP8O43823 692 aaKnown RBP12.2□□□□□ -0.46
VARS-225ENST00000482996 TPST2O60704 377 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 CCDC22O60826 627 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 IFNA14P01570 189 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 NQO1P15559 274 aaKnown RBP12.2□□□□□ -0.46
VARS-225ENST00000482996 CD247P20963 164 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 ZNF83P51522 516 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 VEZF1Q14119 521 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 ZNF672Q499Z4 452 aaPredicted RBP12.2□□□□□ -0.46
VARS-225ENST00000482996 Q5PR19 223 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 NIPAL3Q6P499 406 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 SPATA21Q7Z572 469 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 KDM8Q8N371 416 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 C10orf53Q8N6V4 93 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 ADPRHL1Q8NDY3 354 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 WFDC11Q8NEX6 87 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 KBTBD8Q8NFY9 601 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 OR6T1Q8NGN1 323 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 VANGL1Q8TAA9 524 aaPredicted RBP12.2□□□□□ -0.46
VARS-225ENST00000482996 PROX1Q92786 737 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 PERPQ96FX8 193 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 RADILQ96JH8 1075 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 ELAC2Q9BQ52 826 aaKnown RBP12.2□□□□□ -0.46
VARS-225ENST00000482996 ASPNQ9BXN1 380 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 SLC17A5Q9NRA2 495 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 NPAP1Q9NZP6 1156 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 ARMCX1Q9P291 453 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 MGAT4BQ9UQ53 548 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 RCE1Q9Y256 329 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 AP3M1Q9Y2T2 418 aa12.2□□□□□ -0.46
VARS-225ENST00000482996 RAI1Q7Z5J4 1906 aaPredicted RBP12.19□□□□□ -0.46
VARS-225ENST00000482996 PLCE1Q9P212 2302 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 A0A1W2PR80 420 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 TRAPPC13A5PLN9 417 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 CPSF4LA6NMK7 179 aaKnown RBP12.19□□□□□ -0.46
VARS-225ENST00000482996 ABCD4O14678 606 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 CHP2O43745 196 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 SLC43A1O75387 559 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 WNT11O96014 354 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 FOSL1P15407 271 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 CDH2P19022 906 aaPredicted RBP12.19□□□□□ -0.46
VARS-225ENST00000482996 DRD4P21917 467 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 CBLP22681 906 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 PTAFRP25105 342 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 SELENOPP49908 381 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 CDH11P55287 796 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 CLDN17P56750 224 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 RPS4XP62701 263 aaKnown RBP12.19□□□□□ -0.46
VARS-225ENST00000482996 ENTPD8Q5MY95 495 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 HMBOX1Q6NT76 420 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 PRSS57Q6UWY2 283 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 ARPINQ7Z6K5 226 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 SCAIQ8N9R8 606 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 CCDC197Q8NCU1 140 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 RP9Q8TA86 221 aaKnown RBP12.19□□□□□ -0.46
VARS-225ENST00000482996 SMAP2Q8WU79 429 aaPredicted RBP12.19□□□□□ -0.46
VARS-225ENST00000482996 RCN3Q96D15 328 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 GSX2Q9BZM3 304 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 LINC00470Q9BZP3 86 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 SEC14L4Q9UDX3 406 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 BAG5Q9UL15 447 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 LAMP3Q9UQV4 416 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 VPS13CQ709C8 3753 aa12.19□□□□□ -0.46
VARS-225ENST00000482996 LOC102725191A0A1B0GVB3 256 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 FAM220BPB1ANY3 271 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 M0R1B8 84 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 MT-ATP6P00846 226 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 BGLAPP02818 100 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 PTH2RP49190 550 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 SH3BGRP55822 239 aaPredicted RBP12.18□□□□□ -0.46
VARS-225ENST00000482996 PRPS1P60891 318 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 PMS2P3Q13401 168 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 NPTX1Q15818 432 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 TTC33Q6PID6 262 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms