RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 P2RY4P51582 365 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 COX10Q12887 443 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 MRPL49Q13405 166 aaKnown RBP10.93□□□□□ -0.66
SDC1-206ENST00000482879 DAG1Q14118 895 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 IGFBP7Q16270 282 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 LRRC36Q1X8D7 754 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 MS4A18Q3C1V0 323 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 ANKDD1AQ495B1 522 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 NSUN5P2Q63ZY6 315 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 RTL6Q6ICC9 239 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 CD300LDQ6UXZ3 194 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 C3P1Q6ZMU1 363 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 SLC43A2Q8N370 569 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 KDM8Q8N371 416 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 GALNT11Q8NCW6 608 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 ADPRHL1Q8NDY3 354 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 DNAJC9Q8WXX5 260 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 WNT2BQ93097 391 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 SLC29A1Q99808 456 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 RBM4BQ9BQ04 359 aaKnown RBP10.93□□□□□ -0.66
SDC1-206ENST00000482879 RBM4Q9BWF3 364 aaKnown RBP10.93□□□□□ -0.66
SDC1-206ENST00000482879 OSBPL10Q9BXB5 764 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 MCCC2Q9HCC0 563 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 PAPOLBQ9NRJ5 636 aaKnown RBP10.93□□□□□ -0.66
SDC1-206ENST00000482879 TAS2R5Q9NYW4 299 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 KLHL13Q9P2N7 655 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 CLCF1Q9UBD9 225 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 TINAGQ9UJW2 476 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 OSGIN2Q9Y236 505 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 RASD1Q9Y272 281 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 SIGLEC7Q9Y286 467 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 KALRNO60229 2985 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 FREM1Q5H8C1 2179 aa10.93□□□□□ -0.66
SDC1-206ENST00000482879 TRGV8A0A0C4DH27 118 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 EI24O14681 340 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 CASQ2O14958 399 aaPredicted RBP10.92□□□□□ -0.66
SDC1-206ENST00000482879 RNF13O43567 381 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 CYTIPO60759 359 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 MITFO75030 526 aaPredicted RBP10.92□□□□□ -0.66
SDC1-206ENST00000482879 VAMP5O95183 116 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 RCBTB2O95199 551 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 HPRP00739 348 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 TSPAN19P0C672 248 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 FCGR2AP12318 317 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 PEX2P28328 305 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 UQCRC1P31930 480 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 PRPS1P60891 318 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 RPS4XP62701 263 aaKnown RBP10.92□□□□□ -0.66
SDC1-206ENST00000482879 PPP2R2BQ00005 443 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 RPL18Q07020 188 aaKnown RBP10.92□□□□□ -0.66
SDC1-206ENST00000482879 PUDPQ08623 228 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 RASGEF1BQ0VAM2 473 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 ZP4Q12836 540 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 FHL1Q13642 323 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 TAF11Q15544 211 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 OGFRL1Q5TC84 451 aaPredicted RBP10.92□□□□□ -0.66
SDC1-206ENST00000482879 FBXW10Q5XX13 1052 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 KDM4DQ6B0I6 523 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 GTF2IRD2BQ6EKJ0 949 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 KLHL17Q6TDP4 642 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 B3GNT6Q6ZMB0 384 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 RASSF6Q6ZTQ3 369 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 GALNT5Q7Z7M9 940 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 GPAT4Q86UL3 456 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 GTF2IRD2Q86UP8 949 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 MCEMP1Q8IX19 187 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 GALNT4Q8N4A0 578 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 MOSPD2Q8NHP6 518 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 MAGEE2Q8TD90 523 aaPredicted RBP10.92□□□□□ -0.66
SDC1-206ENST00000482879 ABHD3Q8WU67 409 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 OXGR1Q96P68 337 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 NDEL1Q9GZM8 345 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 KRT84Q9NSB2 600 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 USE1Q9NZ43 259 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 POFUT2Q9Y2G5 429 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 HIF3AQ9Y2N7 669 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 FAM215AQ9Y5M1 114 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 CFAP46Q8IYW2 2715 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 HIVEP3Q5T1R4 2406 aa10.92□□□□□ -0.66
SDC1-206ENST00000482879 SERPINI2O75830 405 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 NDUFB2O95178 105 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 SOX14O95416 240 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 F13BP05160 661 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 ALPLP05186 524 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 IGFBP1P08833 259 aaPredicted RBP10.91□□□□□ -0.66
SDC1-206ENST00000482879 OSMP13725 252 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 ZNF26P17031 533 aaPredicted RBP10.91□□□□□ -0.66
SDC1-206ENST00000482879 IGFBP5P24593 272 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 RPL4P36578 427 aaKnown RBP10.91□□□□□ -0.66
SDC1-206ENST00000482879 CA7P43166 264 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 ALDH3A2P51648 485 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 C1DQ13901 141 aaKnown RBP10.91□□□□□ -0.66
SDC1-206ENST00000482879 SLC17A1Q14916 467 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 RNPS1Q15287 305 aaKnown RBP10.91□□□□□ -0.66
SDC1-206ENST00000482879 RFX4Q33E94 735 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 ALG10Q5BKT4 473 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 ABLIM2Q6H8Q1 611 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 SMARCD3Q6STE5 483 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 ZNF620Q6ZNG0 422 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 IGFN1Q86VF2 1251 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms