RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 TBRG1Q3YBR2 411 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 RUNDC3AQ59EK9 446 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 AGAP6Q5VW22 663 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 CARD17Q5XLA6 110 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 C6orf89Q6UWU4 347 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 DTX2Q86UW9 622 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 PTOV1Q86YD1 416 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 FBXL14Q8N1E6 418 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 MUC15Q8N387 334 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 OR1K1Q8NGR3 316 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 VANGL1Q8TAA9 524 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-212ENST00000482251 SLC38A4Q969I6 547 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 ZNF607Q96SK3 696 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 CGREF1Q99674 301 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 DHRS9Q9BPW9 319 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 TMEM120AQ9BXJ8 343 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 RABEP2Q9H5N1 569 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 PIF1Q9H611 641 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 VIPAS39Q9H9C1 493 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 SELENONQ9NZV5 590 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 KLHL14Q9P2G3 628 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 B3GAT1Q9P2W7 334 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 TRIM33Q9UPN9 1127 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 MOKQ9UQ07 419 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 MGAT4BQ9UQ53 548 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 B3GALT5Q9Y2C3 310 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 NDUFAF1Q9Y375 327 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 NSD1Q96L73 2696 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-212ENST00000482251 TRAV36DV7A0A075B6V5 113 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 A0A0B4J2E0 115 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 A0A1B0GX12 115 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 PRORSD1PA6NEY8 169 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 CPSF4LA6NMK7 179 aaKnown RBP9.15□□□□□ -0.94
CPSF4-212ENST00000482251 AIM2O14862 343 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 TPST2O60704 377 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 SERPINB7O75635 380 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 MFN2O95140 757 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 VAMP5O95183 116 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 WNT11O96014 354 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 HPRP00739 348 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 HLA-DOBP13765 273 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 ZNF43P17038 809 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 TTKP33981 857 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 NUDT6P53370 316 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 CDH12P55289 794 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 UBE2NP61088 152 aaKnown RBP9.15□□□□□ -0.94
CPSF4-212ENST00000482251 ROR2Q01974 943 aaKnown RBP9.15□□□□□ -0.94
CPSF4-212ENST00000482251 FAM69AQ5T7M9 428 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 C11orf71Q6IPW1 123 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 HMBOX1Q6NT76 420 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 ULK3Q6PHR2 472 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 SSX8Q7RTT4 187 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 ABHD12BQ7Z5M8 362 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-212ENST00000482251 RANBP3LQ86VV4 465 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-212ENST00000482251 DEPDC4Q8N2C3 294 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 C10orf53Q8N6V4 93 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 LSMEM1Q8N8F7 131 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 C11orf65Q8NCR3 313 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 DNAJA4Q8WW22 397 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-212ENST00000482251 SLC35B4Q969S0 331 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 ANKRD27Q96NW4 1050 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 MOGAT1Q96PD6 335 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 SEC61A2Q9H9S3 476 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 TMEM27Q9HBJ8 222 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 CBLN4Q9NTU7 201 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 TMEM45AQ9NWC5 275 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 CR1P17927 2039 aa9.15□□□□□ -0.94
CPSF4-212ENST00000482251 PLCE1Q9P212 2302 aa9.15□□□□□ -0.95
CPSF4-212ENST00000482251 TLN2Q9Y4G6 2542 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 ZANQ9Y493 2812 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 IGHV1-18A0A0C4DH31 117 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 KPNA4O00629 521 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-212ENST00000482251 TRAF3IP2O43734 574 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-212ENST00000482251 SLC43A1O75387 559 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 LY6HO94772 140 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 PCBP3P57721 371 aaKnown RBP9.14□□□□□ -0.95
CPSF4-212ENST00000482251 PPP2R2BQ00005 443 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 POU3F1Q03052 451 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-212ENST00000482251 KRTAP1-1Q07627 177 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 NPTX1Q15818 432 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 ETFDHQ16134 617 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 DUSP7Q16829 419 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 VHLLQ6RSH7 139 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 MYPOPQ86VE0 399 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-212ENST00000482251 RBM45Q8IUH3 476 aaKnown RBP9.14□□□□□ -0.95
CPSF4-212ENST00000482251 UEVLDQ8IX04 471 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 GPR137CQ8N3F9 429 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 DPP10Q8N608 796 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 GPR32P1Q8NGA4 272 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 OR10A6Q8NH74 314 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF837Q96EG3 531 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-212ENST00000482251 SLC47A1Q96FL8 570 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 OXGR1Q96P68 337 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 SLC38A2Q96QD8 506 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 MCHR1Q99705 422 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 KCNS3Q9BQ31 491 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 EMC6Q9BV81 110 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 REG4Q9BYZ8 158 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 NELFAQ9H3P2 528 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 FKRPQ9H9S5 495 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms