RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	C11orf65	Q8NCR3	313 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	GPR32P1	Q8NGA4	272 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	ZNF417	Q8TAU3	575 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	SLC38A4	Q969I6	547 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	RADIL	Q96JH8	1075 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	ZNF587	Q96SQ5	575 aa	Predicted RBP	13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	ARHGDIG	Q99819	225 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	GRIP2	Q9C0E4	1043 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	NELFA	Q9H3P2	528 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	MGAT4B	Q9UQ53	548 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	ANGPT4	Q9Y264	503 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	TRAV36DV7	A0A075B6V5	113 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596		A0A087WUJ7	227 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596		M0R3H8	397 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	SERPINB7	O75635	380 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	LGI1	O95970	557 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	HPR	P00739	348 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	BGLAP	P02818	100 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	CDH2	P19022	906 aa	Predicted RBP	13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	GRPR	P30550	384 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	CRYBA2	P53672	197 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	CDH12	P55289	794 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	CLDN17	P56750	224 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	RBBP4	Q09028	425 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	TNK1	Q13470	666 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	NFYC	Q13952	458 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	NRF1	Q16656	503 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	DUSP7	Q16829	419 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	CYP51A1	Q16850	503 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	SLC22A25	Q6T423	547 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	DNM1P46	Q6ZS02	220 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	OR4D11	Q8NGI4	311 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	OR1K1	Q8NGR3	316 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	GTPBP3	Q969Y2	492 aa	Known RBP	13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	SLC41A3	Q96GZ6	507 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	LINC00470	Q9BZP3	86 aa		13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	GDF2	Q9UK05	429 aa	Predicted RBP	13.14	□□□□□ -0.31
CCNL1-222	ENST00000479596	CSPG4	Q6UVK1	2322 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	ZNF587B	E7ETH6	402 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596		M0QX08	132 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	FXYD1	O00168	92 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	AIM2	O14862	343 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	TRAF3IP2	O43734	574 aa	Predicted RBP	13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	OR2T1	O43869	369 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	LYPD3	O95274	346 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	THY1	P04216	161 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	CD247	P20963	164 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	CBL	P22681	906 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	GTF2E2	P29084	291 aa	Known RBP	13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	TTK	P33981	857 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	NCALD	P61601	193 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	KRTAP1-1	Q07627	177 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	CLEC12B	Q2HXU8	276 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	TBRG1	Q3YBR2	411 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	C1QTNF12	Q5T7M4	302 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	NHLRC1	Q6VVB1	395 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	WDFY1	Q8IWB7	410 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	ADPRHL1	Q8NDY3	354 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	OR6S1	Q8NH40	331 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	BCL2L2	Q92843	193 aa	Predicted RBP	13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	TAMM41	Q96BW9	452 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	SLC47A1	Q96FL8	570 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	TRMT61A	Q96FX7	289 aa	Known RBP	13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	OXGR1	Q96P68	337 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	MOGAT1	Q96PD6	335 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	DHRS9	Q9BPW9	319 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	EVA1A	Q9H8M9	152 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	FGFR1OP2	Q9NVK5	253 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	FAIM	Q9NVQ4	179 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	RCE1	Q9Y256	329 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	B3GALT5	Q9Y2C3	310 aa		13.13	□□□□□ -0.31
CCNL1-222	ENST00000479596	LOC102725191	A0A1B0GVB3	256 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	OR6C65	A6NJZ3	312 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	FAM171A2	A8MVW0	826 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	LRRN3	E7EW58	273 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	MS4A18	H0YCH9	400 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	FMO6P	O60774	539 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	C8B	P07358	591 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	ZNF43	P17038	809 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	PCGF2	P35227	344 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	ACVR1B	P36896	505 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	PRPS1	P60891	318 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	ETFDH	Q16134	617 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	TRMT5	Q32P41	509 aa	Known RBP	13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	MS4A18	Q3C1V0	323 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	SWT1	Q5T5J6	900 aa	Known RBP	13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	LINC00114	Q6XXX2	140 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	WDR88	Q6ZMY6	472 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	H1FNT	Q75WM6	255 aa	Predicted RBP	13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	RBM45	Q8IUH3	476 aa	Known RBP	13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	TMEM123	Q8N131	208 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	OR6T1	Q8NGN1	323 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	OR10A6	Q8NH74	314 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	ZNF837	Q96EG3	531 aa	Predicted RBP	13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	OR2M2	Q96R28	347 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	ALG2	Q9H553	416 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms