RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ANGPTL1O95841 491 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 NUDT14O95848 222 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 PAHP00439 452 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 CSTAP01040 98 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 IGKV1D-16P01601 117 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 KRT8P05787 483 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 CHRM4P08173 479 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 TFPTP0C1Z6 253 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 NPIPA8P0DM63 369 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 GAAP10253 952 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 ATP6V1B1P15313 513 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 CD1EP15812 388 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF26P17031 533 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-209ENST00000479532 MYF6P23409 242 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 SLC6A8P48029 635 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 DNASE1L1P49184 302 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF41P51814 821 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-209ENST00000479532 SLC7A2P52569 658 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 MVDP53602 400 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 SUMO3P55854 103 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-209ENST00000479532 TPTEP56180 551 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 PPIAP62937 165 aaKnown RBP5.6□□□□□ -1.51
SF3B1-209ENST00000479532 SLC25A3Q00325 362 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 LIPEQ05469 1076 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 SCRN3Q0VDG4 424 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 VEZF1Q14119 521 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF141Q15928 474 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 LRRC36Q1X8D7 754 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF181Q2M3W8 571 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 RABL3Q5HYI8 236 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF311Q5JNZ3 666 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 PDZK1Q5T2W1 519 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 TIGD3Q6B0B8 471 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 SHQ1Q6PI26 577 aaKnown RBP5.6□□□□□ -1.51
SF3B1-209ENST00000479532 FRRS1Q6ZNA5 592 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 MARCH3Q86UD3 253 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 IFNEQ86WN2 208 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 PLCZ1Q86YW0 608 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 ARMC8Q8IUR7 673 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF440Q8IYI8 595 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 MICU2Q8IYU8 434 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 DEFB107AQ8IZN7 70 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 PARP8Q8N3A8 854 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 GATSQ8NAP1 163 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 ZFP62Q8NB50 900 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-209ENST00000479532 OR4C3Q8NH37 302 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 OR52P1PQ8NH57 321 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 GRHL3Q8TE85 626 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 MAL2Q969L2 176 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 OPALINQ96PE5 141 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 COQ7Q99807 217 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 TREX2Q9BQ50 279 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-209ENST00000479532 HES7Q9BYE0 225 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 TTTY12Q9BZ98 90 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 SLC38A1Q9H2H9 487 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 IKZF5Q9H5V7 419 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 LDAHQ9H6V9 325 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 EXO5Q9H790 373 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 GALNT9Q9HCQ5 603 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 BCL2L10Q9HD36 194 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 OLAHQ9NV23 265 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 LUZP4Q9P127 313 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 TMEM181Q9P2C4 612 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 SEC14L3Q9UDX4 400 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 DKKL1Q9UK85 242 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 GRIP1Q9Y3R0 1128 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 KLF2Q9Y5W3 355 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-209ENST00000479532 CELSR3Q9NYQ7 3312 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 EML6Q6ZMW3 1958 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 CACNA1BQ00975 2339 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 DSPPQ9NZW4 1301 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 A0A087WZY1 265 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 AGAP5A6NIR3 686 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 FAM166BA8MTA8 275 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 TRIM77I1YAP6 450 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 HCRTR2O43614 444 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 CDC40O60508 579 aaKnown RBP eCLIP5.59□□□□□ -1.51
SF3B1-209ENST00000479532 FCMRO60667 390 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 B3GALNT1O75752 331 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 TUSC2O75896 110 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 SEC14L2O76054 403 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 SORBS2O94875 1100 aaKnown RBP5.59□□□□□ -1.51
SF3B1-209ENST00000479532 C1QCP02747 245 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 RHCEP18577 417 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 PGCP20142 388 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 SRD5A2P31213 254 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 DDOSTP39656 456 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 SLC9A3P48764 834 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 P2RX1P51575 399 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 CCR4P51679 360 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 DSCR4P56555 118 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-209ENST00000479532 COPZ1P61923 177 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 KCNJ10P78508 379 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 RBPJQ06330 500 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 FUT5Q11128 374 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 BNIP2Q12982 314 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 CBFBQ13951 182 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 FGFBP1Q14512 234 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 SLC10A1Q14973 349 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 INPP5JQ15735 1006 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms