RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 OPN5Q6U736 354 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 CEACAM20Q6UY09 585 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 PRSS3P2Q8NHM4 247 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 TMEM163Q8TC26 289 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 PINX1Q96BK5 328 aaKnown RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 L3HYPDHQ96EM0 354 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 ADGRG7Q96K78 797 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 KCNA7Q96RP8 456 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 UTP23Q9BRU9 249 aaKnown RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 SMG9Q9H0W8 520 aaKnown RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 POPDC3Q9HBV1 291 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 NECAP2Q9NVZ3 263 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 CGGBP1Q9UFW8 167 aaPredicted RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 NDRG2Q9UN36 371 aaKnown RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 ARL2-SNX15V9GYD0 113 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 LOC389332A0A1B0GUA5 103 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 CDC14CA4D256 554 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 PER1O15534 1290 aaPredicted RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 FAM157CP0CG43 387 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 CPEP16870 476 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 PSMB4P28070 264 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 CORO1AP31146 461 aaKnown RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 HADHBP55084 474 aaKnown RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 MTCP1P56278 107 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 SSX1Q16384 188 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 AMHR2Q16671 573 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 PRAMEF8Q5VWM4 474 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 PRAMEF7Q5VXH5 474 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 METTL2BQ6P1Q9 378 aaKnown RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 SLC25A42Q86VD7 318 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 LGI4Q8N135 537 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 CD99L2Q8TCZ2 262 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 DYNLRB2Q8TF09 96 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 RNF141Q8WVD5 230 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 SH3YL1Q96HL8 342 aaPredicted RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 NMUR2Q9GZQ4 415 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 UBQLN3Q9H347 655 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 GDE1Q9NZC3 331 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 PUS1Q9Y606 427 aaKnown RBP eCLIP5.08□□□□□ -1.6
USF3-202ENST00000478658 CHD2O14647 1828 aaKnown RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 ALG1L2C9J202 215 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 VAMP5O95183 116 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 FOLR1P15328 257 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 ARSBP15848 533 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 NPPBP16860 134 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 CTSSP25774 331 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 SSTR4P31391 388 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 MEOX2P50222 304 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 KCNJ10P78508 379 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 PJVKQ0ZLH3 352 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 VWA2Q5GFL6 755 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 PPM1JQ5JR12 505 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 ASCL5Q7RTU5 278 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 AQP11Q8NBQ7 271 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 OR5M8Q8NGP6 311 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 SCARB1Q8WTV0 552 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 UBTD2Q8WUN7 234 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 NUDT22Q9BRQ3 303 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 ALOXE3Q9BYJ1 711 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 SFXN1Q9H9B4 322 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 C1GALT1Q9NS00 363 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 GMPR2Q9P2T1 348 aaKnown RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 HHLA2Q9UM44 414 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 CFAP20Q9Y6A4 193 aaKnown RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 SLIT1O75093 1534 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 TCRBV21S2A2A0A5A6 115 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 FABP7O15540 132 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 ERI3O43414 337 aaKnown RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 ADAP1O75689 374 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 OR4Q2P0C623 313 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 TACR2P21452 398 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 POU3F4P49335 361 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 NKX2-5P52952 324 aaPredicted RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 DLX5P56178 289 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 DUSP8Q13202 625 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 C17orf78Q8N4C9 275 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 SGMS2Q8NHU3 365 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 SECTM1Q8WVN6 248 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 ST8SIA4Q92187 359 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 PYURFQ96I23 114 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 CXorf21Q9HAI6 301 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 S100A14Q9HCY8 104 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 TMPRSS4Q9NRS4 437 aa5.08□□□□□ -1.6
USF3-202ENST00000478658 ATF5Q9Y2D1 282 aaPredicted RBP5.08□□□□□ -1.6
USF3-202ENST00000478658 HIDE1A8MVS5 230 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 HKR1P10072 659 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 AOC1P19801 751 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 RPL35P42766 123 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 CLDN6P56747 220 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 CD81P60033 236 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 CLPPQ16740 277 aaPredicted RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 SMUG1Q53HV7 270 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 FRG2Q64ET8 278 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 MBLAC2Q68D91 279 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 C16orf46Q6P387 395 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ZNF585AQ6P3V2 769 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 PLXDC2Q6UX71 529 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ASPGQ86U10 573 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 CPOQ8IVL8 374 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 VWA5B2Q8N398 1253 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms