RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	HTRA4	P83105	476 aa	Predicted RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	EFNB1	P98172	346 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SEMG2	Q02383	582 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TNFRSF9	Q07011	255 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	GAB1	Q13480	694 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	RBMS2	Q15434	407 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNHIT3	Q15649	155 aa	Predicted RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	UGT8	Q16880	541 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	CHRFAM7A	Q494W8	412 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	XKR6	Q5GH73	641 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	NSUN5P2	Q63ZY6	315 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	GLT8D1	Q68CQ7	371 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR10K2	Q6IF99	312 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	RAB12	Q6IQ22	244 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TRIM40	Q6P9F5	258 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TMEM88	Q6PEY1	159 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TSSK4	Q6SA08	328 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC22A25	Q6T423	547 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TMEM207	Q6UWW9	146 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	C6orf15	Q6UXA7	325 aa	Predicted RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	RBMS3	Q6XE24	437 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SPNS3	Q6ZMD2	512 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF852	Q6ZMS4	543 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC24A5	Q71RS6	500 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	RTL10	Q7L3V2	364 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC29A4	Q7RTT9	530 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	P4HA3	Q7Z4N8	544 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	DEFB128	Q7Z7B8	93 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	MRGPRE	Q86SM8	312 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	LDB1	Q86U70	411 aa	Predicted RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF546	Q86UE3	836 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	PTOV1	Q86YD1	416 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	GID4	Q8IVV7	300 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	LRRC52	Q8N7C0	313 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SAMD12	Q8N8I0	201 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF383	Q8NA42	475 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	PNLDC1	Q8NA58	520 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	POGLUT1	Q8NBL1	392 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	AQP11	Q8NBQ7	271 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF485	Q8NCK3	441 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC30A7	Q8NEW0	376 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR2AK2	Q8NG84	335 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR4F15	Q8NGB8	312 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR11G2	Q8NGC1	345 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR1J2	Q8NGS2	313 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR2L8	Q8NGY9	312 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR4Q3	Q8NH05	313 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR10J5	Q8NHC4	309 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	GOT1L1	Q8NHS2	421 aa	Predicted RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	BBS10	Q8TAM1	723 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	M1AP	Q8TC57	530 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SPPL2A	Q8TCT8	520 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	DTD1	Q8TEA8	209 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	C2CD4C	Q8TF44	421 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	NTN5	Q8WTR8	489 aa	Predicted RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	UBTD2	Q8WUN7	234 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	PCNP	Q8WW12	178 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	FCAMR	Q8WWV6	532 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	BAD	Q92934	168 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	MR1	Q95460	341 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	HIST1H2BA	Q96A08	127 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	MTFMT	Q96DP5	389 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	MYEOV	Q96EZ4	313 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	MED8	Q96G25	268 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC41A3	Q96GZ6	507 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SENP5	Q96HI0	755 aa	Predicted RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SCLY	Q96I15	445 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TPD52L3	Q96J77	140 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	FCRL4	Q96PJ5	515 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR5B2	Q96R09	309 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	MAP3K3	Q99759	626 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TCF25	Q9BQ70	676 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	MRPL45	Q9BRJ2	306 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TGIF2	Q9GZN2	237 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	HAPLN2	Q9GZV7	340 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	FXYD6	Q9H0Q3	95 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	IKZF5	Q9H5V7	419 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	METTL8	Q9H825	291 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SFXN1	Q9H9B4	322 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	IL23A	Q9NPF7	189 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLAMF7	Q9NQ25	335 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ACER3	Q9NUN7	267 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	OSER1	Q9NX31	292 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	RCC2	Q9P258	522 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	PTGFRN	Q9P2B2	879 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	GALP	Q9UBC7	116 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	GIMAP2	Q9UG22	337 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZDHHC8	Q9ULC8	765 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ANGPT4	Q9Y264	503 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	EXOG	Q9Y2C4	368 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC35A3	Q9Y2D2	325 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	GOLT1B	Q9Y3E0	138 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	FBXO7	Q9Y3I1	522 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ATG4B	Q9Y4P1	393 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TIMM10B	Q9Y5J6	103 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	PTGDR2	Q9Y5Y4	395 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520		V9GYS6	101 aa		4.32	□□□□□ -1.72

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