RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 P2RY4P51582 365 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 PMS2P3Q13401 168 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 FLOT2Q14254 428 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 SP5Q6BEB4 398 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-205ENST00000477508 NUFIP2Q7Z417 695 aaKnown RBP11.66□□□□□ -0.54
TOP3A-205ENST00000477508 TSEN54Q7Z6J9 526 aaKnown RBP11.66□□□□□ -0.54
TOP3A-205ENST00000477508 GPAT4Q86UL3 456 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 ZDHHC21Q8IVQ6 265 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF100Q8IYN0 542 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 CDK20Q8IZL9 346 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF610Q8N9Z0 462 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 OR5J2Q8NH18 312 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 TMEM255BQ8WV15 326 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 LIPHQ8WWY8 451 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 TMEM45BQ96B21 275 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 SGTBQ96EQ0 304 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 DHRS1Q96LJ7 313 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 MOGAT1Q96PD6 335 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 ENKD1Q9H0I2 346 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 KRCC1Q9NPI7 259 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-205ENST00000477508 MEPEQ9NQ76 525 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-205ENST00000477508 POMPQ9Y244 141 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 FLVCR1Q9Y5Y0 555 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 ADGRG4Q8IZF6 3080 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 OR6C65A6NJZ3 312 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 ENO4A6NNW6 628 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 KPNA4O00629 521 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-205ENST00000477508 AKAP8O43823 692 aaKnown RBP11.65□□□□□ -0.54
TOP3A-205ENST00000477508 RAMP1O60894 148 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 KRT36O76013 467 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 OR7A10O76100 309 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 CH25HO95992 272 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 CD79BP40259 229 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 MAGEA2P43356 314 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 UGT2B15P54855 530 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 LTBQ06643 244 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 PUDPQ08623 228 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 ZP4Q12836 540 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 C1DQ13901 141 aaKnown RBP11.65□□□□□ -0.54
TOP3A-205ENST00000477508 ANKDD1AQ495B1 522 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 IQCCQ4KMZ1 466 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 TFAP2EQ6VUC0 442 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF730Q6ZMV8 503 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 MBOAT2Q6ZWT7 520 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 CREB3L2Q70SY1 520 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 PXKQ7Z7A4 578 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 ACBD4Q8NC06 268 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 APH1AQ96BI3 265 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 SEPHS2Q99611 448 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 USB1Q9BQ65 265 aaKnown RBP11.65□□□□□ -0.54
TOP3A-205ENST00000477508 HDHD5Q9BXW7 423 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 OPN3Q9H1Y3 402 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-205ENST00000477508 C12orf49Q9H741 205 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 YY1AP1Q9H869 796 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 MAN2C1Q9NTJ4 1040 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 GALNT8Q9NY28 637 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-205ENST00000477508 RHCGQ9UBD6 479 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 TMEM5Q9Y2B1 443 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 NOX1Q9Y5S8 564 aa11.65□□□□□ -0.54
TOP3A-205ENST00000477508 A0A087WUU8 490 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 PLPP3O14495 311 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 GADD45GO95257 159 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 ASAH2BP0C7U1 165 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 RAP2AP10114 183 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 COX6B1P14854 86 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 POU2F1P14859 743 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 IGFBP2P18065 325 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 FUT1P19526 365 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 PTNP21246 168 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 CBLP22681 906 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 IL1RL1Q01638 556 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 PRKCDQ05655 676 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 P2RY6Q15077 328 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 FGD3Q5JSP0 725 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 ZNF474Q6S9Z5 364 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-205ENST00000477508 CASP12Q6UXS9 341 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 Q6ZT83 130 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 AAED1Q7RTV5 226 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 SPATA24Q86W54 205 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 UEVLDQ8IX04 471 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 DMRTC2Q8IXT2 367 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-205ENST00000477508 PFN4Q8NHR9 129 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 SLC7A13Q8TCU3 470 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 ZNF775Q96BV0 537 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-205ENST00000477508 BPIFA2Q96DR5 249 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 NDRG3Q9UGV2 375 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 SLC7A8Q9UHI5 535 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 TMCC3Q9ULS5 477 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 RCE1Q9Y256 329 aa11.64□□□□□ -0.55
TOP3A-205ENST00000477508 UTP20O75691 2785 aaKnown RBP11.63□□□□□ -0.55
TOP3A-205ENST00000477508 HECTD1Q9ULT8 2610 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 DHRS12A0PJE2 317 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 LRRN3E7EW58 273 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 MS4A18H0YCH9 400 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 C16orf97H3BN30 126 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 HNRNPRO43390 633 aaKnown RBP11.63□□□□□ -0.55
TOP3A-205ENST00000477508 DIRAS1O95057 198 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 ADORA3P0DMS8 318 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 IFI30P13284 250 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms