RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 PEX5LQ8IYB4 626 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 GPR137CQ8N3F9 429 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 TRIML2Q8N7C3 387 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 CLDND2Q8NHS1 167 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 RDH5Q92781 318 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 MRPL24Q96A35 216 aaKnown RBP10.87□□□□□ -0.67
SKA3-206ENST00000475251 APOPT1Q96IL0 206 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 C16orf45Q96MC5 204 aaPredicted RBP10.87□□□□□ -0.67
SKA3-206ENST00000475251 SLC35A5Q9BS91 424 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 SUCNR1Q9BXA5 334 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 NELFAQ9H3P2 528 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 TPK1Q9H3S4 243 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 SEC61A2Q9H9S3 476 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 NOX3Q9HBY0 568 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 CRLF2Q9HC73 371 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 MKS1Q9NXB0 559 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 REV1Q9UBZ9 1251 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 NOX1Q9Y5S8 564 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 LYNX1G3V0Z9 82 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 HMGN4O00479 90 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 FRS3O43559 492 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 AKAP8O43823 692 aaKnown RBP10.86□□□□□ -0.67
SKA3-206ENST00000475251 SLC43A1O75387 559 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 CELA3BP08861 270 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 TFPTP0C1Z6 253 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 FAM153BP0C7A2 387 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 LYNX1P0DP58 116 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 GAAP10253 952 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 ZNF43P17038 809 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 EPHA1P21709 976 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 NR4A1P22736 598 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 CAPZA2P47755 286 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 P2RY4P51582 365 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 ARFIP2P53365 341 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 RPS23P62266 143 aaKnown RBP10.86□□□□□ -0.67
SKA3-206ENST00000475251 MRPS11P82912 194 aaKnown RBP10.86□□□□□ -0.67
SKA3-206ENST00000475251 ARF1P84077 181 aaKnown RBP10.86□□□□□ -0.67
SKA3-206ENST00000475251 PRR31Q5SQ13 230 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 MRPL2Q5T653 305 aaKnown RBP10.86□□□□□ -0.67
SKA3-206ENST00000475251 C1orf140Q5VVS0 124 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 KRT80Q6KB66 452 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 FAHD2BQ6P2I3 314 aaPredicted RBP10.86□□□□□ -0.67
SKA3-206ENST00000475251 LINGO2Q7L985 606 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 ANKRD46Q86W74 232 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 CADM2Q8N3J6 435 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 UBLCP1Q8WVY7 318 aaPredicted RBP10.86□□□□□ -0.67
SKA3-206ENST00000475251 TESCQ96BS2 214 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 FAHD2AQ96GK7 314 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 ZNF416Q9BWM5 594 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 SLC38A1Q9H2H9 487 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 LPAR2Q9HBW0 351 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 SLC52A3Q9NQ40 469 aa10.86□□□□□ -0.67
SKA3-206ENST00000475251 AHSA1O95433 338 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 SHBGP04278 402 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 GSNP06396 782 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 NUDT17P0C025 328 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 RPS4Y1P22090 263 aaKnown RBP10.85□□□□□ -0.67
SKA3-206ENST00000475251 CLNS1AP54105 237 aaKnown RBP10.85□□□□□ -0.67
SKA3-206ENST00000475251 CLDN17P56750 224 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 MYBPC1Q00872 1141 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 SYPL1Q16563 259 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 TRMT5Q32P41 509 aaKnown RBP10.85□□□□□ -0.67
SKA3-206ENST00000475251 ZNF311Q5JNZ3 666 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 ELFN2Q5R3F8 820 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 ANKFN1Q8N957 763 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 PIK3C3Q8NEB9 887 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 MFSD8Q8NHS3 518 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 STK35Q8TDR2 534 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 MECRQ9BV79 373 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 RACGAP1Q9H0H5 632 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 ARMC7Q9H6L4 198 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 NARFLQ9H6Q4 476 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 ZNF696Q9H7X3 374 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 CACYBPQ9HB71 228 aaKnown RBP10.85□□□□□ -0.67
SKA3-206ENST00000475251 ZDHHC2Q9UIJ5 367 aa10.85□□□□□ -0.67
SKA3-206ENST00000475251 PRAMEF27A3QJZ7 478 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 CDHR4A6H8M9 788 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 ZNF99A8MXY4 864 aaPredicted RBP10.84□□□□□ -0.67
SKA3-206ENST00000475251 TMEM229AB2RXF0 380 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 RGS9O75916 674 aaPredicted RBP10.84□□□□□ -0.67
SKA3-206ENST00000475251 ZNF432O94892 652 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 BCL10O95999 233 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 IGFBP1P08833 259 aaPredicted RBP10.84□□□□□ -0.67
SKA3-206ENST00000475251 NR2F1P10589 423 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 NCF2P19878 526 aaPredicted RBP10.84□□□□□ -0.67
SKA3-206ENST00000475251 LSP1P33241 339 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 GLRXP35754 106 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 GALK2Q01415 458 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 LRRC74AQ0VAA2 488 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 BNIP2Q12982 314 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 CASP8Q14790 479 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 CEACAM16Q2WEN9 425 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 MMEL1Q495T6 779 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 LIN52Q52LA3 116 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 AWAT1Q58HT5 328 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 GKAP1Q5VSY0 366 aaPredicted RBP10.84□□□□□ -0.67
SKA3-206ENST00000475251 SHISA2Q6UWI4 295 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 MDP1Q86V88 176 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 MYPOPQ86VE0 399 aaPredicted RBP10.84□□□□□ -0.67
SKA3-206ENST00000475251 RNF130Q86XS8 419 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms