RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 CMTM5Q96DZ9 223 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 VRK1Q99986 396 aaPredicted RBP13.63□□□□□ -0.23
SRRT-209ENST00000474896 SLAMF8Q9P0V8 285 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 FKBP7Q9Y680 259 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 IGHV4-61A0A0C4DH41 118 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 ZC3H12DA2A288 527 aaKnown RBP13.62□□□□□ -0.23
SRRT-209ENST00000474896 HAX1O00165 279 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 NDUFS8O00217 210 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 MRASO14807 208 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 TGFAP01135 160 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 C1QCP02747 245 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 CHI3L1P36222 383 aaPredicted RBP13.62□□□□□ -0.23
SRRT-209ENST00000474896 SERPINF1P36955 418 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 SLC1A3P43003 542 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 KHKP50053 298 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 HPCAP84074 193 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 NFYCQ13952 458 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 OTUD3Q5T2D3 398 aaPredicted RBP13.62□□□□□ -0.23
SRRT-209ENST00000474896 PAQR6Q6TCH4 344 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 DLEU7Q6UYE1 221 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 AAED1Q7RTV5 226 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 DHDDSQ86SQ9 333 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 MSRB3Q8IXL7 192 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 TMEM99Q8N816 258 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 TMEM45BQ96B21 275 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 RCN3Q96D15 328 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 NEURL3Q96EH8 262 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 AURKBQ96GD4 344 aaPredicted RBP13.62□□□□□ -0.23
SRRT-209ENST00000474896 ZNF385AQ96PM9 386 aaKnown RBP13.62□□□□□ -0.23
SRRT-209ENST00000474896 SLC25A37Q9NYZ2 338 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 PCDHB14Q9Y5E9 798 aa13.62□□□□□ -0.23
SRRT-209ENST00000474896 TRBV5-3A0A0A0MS03 114 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 LOC390937A0A1W2PQ73 354 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 HMGN4O00479 90 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 KRT33AO76009 404 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 AKR7A3O95154 331 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 HNF1AP20823 631 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 MAP2K6P52564 334 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 SNRPD2P62316 118 aaKnown RBP13.61□□□□□ -0.23
SRRT-209ENST00000474896 CEACAM7Q14002 265 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 SYPL1Q16563 259 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 TRMT5Q32P41 509 aaKnown RBP13.61□□□□□ -0.23
SRRT-209ENST00000474896 SLC46A3Q7Z3Q1 461 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 CMIPQ8IY22 773 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 ANKFN1Q8N957 763 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 POMGNT2Q8NAT1 580 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 PCYOX1LQ8NBM8 494 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 OR9K2Q8NGE7 335 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 PNPT1Q8TCS8 783 aaKnown RBP13.61□□□□□ -0.23
SRRT-209ENST00000474896 KCNS3Q9BQ31 491 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 TPT1P8Q9HAU6 139 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 ARL8BQ9NVJ2 186 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 VAPAQ9P0L0 249 aa13.61□□□□□ -0.23
SRRT-209ENST00000474896 IGHV1-18A0A0C4DH31 117 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 CFAP73A6NFT4 308 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 AGAP5A6NIR3 686 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 KRT75O95678 551 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 GPIP06744 558 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 IL7RP16871 459 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 KRT72Q14CN4 511 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 OR7A5Q15622 319 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 TRPM8Q7Z2W7 1104 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 ABHD12BQ7Z5M8 362 aaPredicted RBP13.6□□□□□ -0.23
SRRT-209ENST00000474896 GPAT4Q86UL3 456 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 RNF130Q86XS8 419 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 BOD1Q96IK1 185 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 TRNT1Q96Q11 434 aaKnown RBP13.6□□□□□ -0.23
SRRT-209ENST00000474896 SLC38A2Q96QD8 506 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 CGREF1Q99674 301 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 SF3B5Q9BWJ5 86 aaKnown RBP13.6□□□□□ -0.23
SRRT-209ENST00000474896 ADAM19Q9H013 955 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 SLC38A1Q9H2H9 487 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 MTHFD2LQ9H903 347 aaPredicted RBP13.6□□□□□ -0.23
SRRT-209ENST00000474896 OBP2BQ9NPH6 170 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 CA10Q9NS85 328 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.6□□□□□ -0.23
SRRT-209ENST00000474896 TAGLN3Q9UI15 199 aa13.6□□□□□ -0.23
SRRT-209ENST00000474896 LIPT2A6NK58 231 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 B9A039 149 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 FXYD1O00168 92 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 CLIC1O00299 241 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 FAAHO00519 579 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 AIM2O14862 343 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 LGI1O95970 557 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 NPPAP01160 153 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 CRYAAP02489 173 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 CHRM4P08173 479 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 OR4A8P0C604 315 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 ZNF23P17027 643 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 CXCR1P25024 350 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 MVDP53602 400 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 LGALS3BPQ08380 585 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 EPS8Q12929 822 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 TBRG1Q3YBR2 411 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 LIPNQ5VXI9 398 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 TMEM225Q6GV28 225 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 ANKRD16Q6P6B7 361 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 VHLLQ6RSH7 139 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 LRRC74BQ6ZQY2 392 aa13.59□□□□□ -0.23
SRRT-209ENST00000474896 ZNF540Q8NDQ6 660 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms