RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 CRNNQ9UBG3 495 aaPredicted RBP12.13□□□□□ -0.47
CCDC78-209ENST00000474647 FBXO9Q9UK97 447 aaPredicted RBP12.13□□□□□ -0.47
CCDC78-209ENST00000474647 PCDHB14Q9Y5E9 798 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 CCDC154A6NI56 674 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 OR6C65A6NJZ3 312 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 VSTM5A8MXK1 200 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 LYNX1G3V0Z9 82 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 IGLV1-44P01699 117 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 TACSTD2P09758 323 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 LYNX1P0DP58 116 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 NCF2P19878 526 aaPredicted RBP12.12□□□□□ -0.47
CCDC78-209ENST00000474647 PAX7P23759 505 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 GTF2E2P29084 291 aaKnown RBP12.12□□□□□ -0.47
CCDC78-209ENST00000474647 CAPZA2P47755 286 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 SLC1A6P48664 564 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 CDH15P55291 814 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 COPZ1P61923 177 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 GSTA3Q16772 222 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 ZSWIM7Q19AV6 140 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 COX20Q5RI15 118 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 C1orf140Q5VVS0 124 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 WBP2NLQ6ICG8 309 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 ZNF836Q6ZNA1 936 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 VRK2Q86Y07 508 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 ZNF440Q8IYI8 595 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 CDK20Q8IZL9 346 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 NUP37Q8NFH4 326 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 LRRC8CQ8TDW0 803 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 SLC25A36Q96CQ1 311 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 CCDC115Q96NT0 180 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 ANKRD27Q96NW4 1050 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 SORT1Q99523 831 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 PLA2G12AQ9BZM1 189 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 PIF1Q9H611 641 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 NARFLQ9H6Q4 476 aa12.12□□□□□ -0.47
CCDC78-209ENST00000474647 MTHFD2LQ9H903 347 aaPredicted RBP12.12□□□□□ -0.47
CCDC78-209ENST00000474647 WNK2Q9Y3S1 2297 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 A8MVM7 634 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 VAMP5O95183 116 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 IGKV3-15P01624 115 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 GSNP06396 782 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 ADRA2AP08913 450 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 CFPP27918 469 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 MDH1P40925 334 aaKnown RBP12.11□□□□□ -0.47
CCDC78-209ENST00000474647 CDKN2CP42773 168 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 P2RY4P51582 365 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 SH3BGRP55822 239 aaPredicted RBP12.11□□□□□ -0.47
CCDC78-209ENST00000474647 CLDN17P56750 224 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 IL1RL1Q01638 556 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 GUCY1A3Q02108 690 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 HGFACQ04756 655 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 SNTB2Q13425 540 aaKnown RBP12.11□□□□□ -0.47
CCDC78-209ENST00000474647 C3orf36Q3SXR2 165 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 LIN52Q52LA3 116 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 KRT80Q6KB66 452 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 ZNF621Q6ZSS3 439 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 EPHX4Q8IUS5 362 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 KDM8Q8N371 416 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 ZNF786Q8N393 782 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 OR52P1PQ8NH57 321 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 MAGEE2Q8TD90 523 aaPredicted RBP12.11□□□□□ -0.47
CCDC78-209ENST00000474647 UBASH3BQ8TF42 649 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 ZNF317Q96PQ6 595 aaPredicted RBP12.11□□□□□ -0.47
CCDC78-209ENST00000474647 NUF2Q9BZD4 464 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 C20orf27Q9GZN8 174 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 CCDC134Q9H6E4 229 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 METTL17Q9H7H0 456 aaPredicted RBP12.11□□□□□ -0.47
CCDC78-209ENST00000474647 ZNF442Q9H7R0 627 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 MOV10Q9HCE1 1003 aaKnown RBP12.11□□□□□ -0.47
CCDC78-209ENST00000474647 THAP1Q9NVV9 213 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 BTNL2Q9UIR0 455 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 HAO1Q9UJM8 370 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 RASD1Q9Y272 281 aa12.11□□□□□ -0.47
CCDC78-209ENST00000474647 IGHV2OR16-5A0A0B4J2B6 119 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 CDHR4A6H8M9 788 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 RGS9O75916 674 aaPredicted RBP12.1□□□□□ -0.47
CCDC78-209ENST00000474647 SEC14L2O76054 403 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 AHSA1O95433 338 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 LBPP18428 481 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 PCMT1P22061 227 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 RPS5P46782 204 aaKnown RBP12.1□□□□□ -0.47
CCDC78-209ENST00000474647 ACTG1P63261 375 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 ARF1P84077 181 aaKnown RBP12.1□□□□□ -0.47
CCDC78-209ENST00000474647 DAG1Q14118 895 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 GLCCI1Q86VQ1 547 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 LRRC34Q8IZ02 419 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 KIRREL3Q8IZU9 778 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 GPR137CQ8N3F9 429 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 TEX37Q96LM6 180 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 C7orf26Q96N11 449 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 OR52E6Q96RD3 313 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 DOK1Q99704 481 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 LINC00470Q9BZP3 86 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 CRLF2Q9HC73 371 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 P2RX2Q9UBL9 471 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 ZNF443Q9Y2A4 671 aaPredicted RBP12.1□□□□□ -0.47
CCDC78-209ENST00000474647 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.1□□□□□ -0.47
CCDC78-209ENST00000474647 RAP2CQ9Y3L5 183 aa12.1□□□□□ -0.47
CCDC78-209ENST00000474647 ZNF503-AS2A6NEH8 195 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms