RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 TOR1AIP2Q8NFQ8 470 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 OR52R1Q8NGF1 315 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 OR9A2Q8NGT5 310 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SFXN5Q8TD22 340 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 CHAC2Q8WUX2 184 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 ELP4Q96EB1 424 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 C1GALT1C1Q96EU7 318 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 GAL3ST4Q96RP7 486 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 RASL10BQ96S79 203 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SECISBP2Q96T21 854 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 POLDIP3Q9BY77 421 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SLA2Q9H6Q3 261 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 BCL2L10Q9HD36 194 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 TIGARQ9NQ88 270 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 TXNL4BQ9NX01 149 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 CNIH4Q9P003 139 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 NTMQ9P121 344 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 LRFN1Q9P244 771 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SEC14L4Q9UDX3 406 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 TESQ9UGI8 421 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 IL20RAQ9UHF4 553 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 STUB1Q9UNE7 303 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SSR3Q9UNL2 185 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 C19orf53Q9UNZ5 99 aaPredicted RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 NTNG1Q9Y2I2 539 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 CHST2Q9Y4C5 530 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 DOCK10Q96BY6 2186 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 MED13Q9UHV7 2174 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 ZZEF1O43149 2961 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SMIM30A4D0T7 59 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 TTLL8A6PVC2 850 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF670-ZNF695F2Z2N8 137 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 ATP6V1G2-DDX39BF2Z307 99 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SMLR1H3BR10 107 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 HRKO00198 91 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 MYL12BO14950 172 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 EMC8O43402 210 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF780AO75290 641 aaPredicted RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC25A12O75746 678 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 RAB36O95755 333 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 CH25HO95992 272 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 P04436 131 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 CTRB1P17538 263 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 M6PRP20645 277 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 PTNP21246 168 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 DDOSTP39656 456 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 MC3RP41968 323 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 KHKP50053 298 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 EMDP50402 254 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SMSP52788 366 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 TAS2R41P59536 307 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 RUNX1T1Q06455 604 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF155Q12901 538 aaPredicted RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 MLLT11Q13015 90 aaPredicted RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 EFR3AQ14156 821 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 EXOSC7Q15024 291 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 LTB4RQ15722 352 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 INPP5JQ15735 1006 aaPredicted RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 KLHL22Q53GT1 634 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 TRMT12Q53H54 448 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 ENTPD8Q5MY95 495 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC25A30Q5SVS4 291 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 ARMC4Q5T2S8 1044 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 FHL5Q5TD97 284 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 CTRB2Q6GPI1 263 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 TMEM64Q6YI46 380 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 IDO2Q6ZQW0 420 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SHFQ7M4L6 423 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 LHFPL3Q86UP9 236 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 NKAIN4Q8IVV8 208 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 LAX1Q8IWV1 398 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 BCORP1Q8N888 145 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 Q8NA96 180 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC16A11Q8NCK7 471 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 OR56A1Q8NGH5 318 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 OR9Q1Q8NGQ5 310 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 C16orf52Q8NHV5 167 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 BBS10Q8TAM1 723 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 CPT1CQ8TCG5 803 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 DOK4Q8TEW6 326 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 THAP3Q8WTV1 239 aaPredicted RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 PCNPQ8WW12 178 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 ADIPOR1Q96A54 375 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SPACA9Q96E40 222 aaPredicted RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC35A4Q96G79 324 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 FAM46AQ96IP4 442 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 LCORQ96JN0 433 aaPredicted RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 PRRC1Q96M27 445 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 OR7D2Q96RA2 312 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 TM9SF2Q99805 663 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 KRTAP3-3Q9BYR6 98 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 KRTAP3-2Q9BYR7 98 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 RACGAP1Q9H0H5 632 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC38A1Q9H2H9 487 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 FOLH1BQ9HBA9 442 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 ABCB9Q9NP78 766 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 NDUFB11Q9NX14 153 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 TBC1D24Q9ULP9 559 aa3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 DIMT1Q9UNQ2 313 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms