RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 MAP1AP78559 2803 aaPredicted RBP3.31□□□□□ -1.88
CNOT4-209ENST00000473470 ZNF106Q9H2Y7 1883 aaKnown RBP3.31□□□□□ -1.88
CNOT4-209ENST00000473470 WDR19Q8NEZ3 1342 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 TRAV9-2A0A087WT02 112 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 TMEM150BA6NC51 233 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 ARL5CA6NH57 179 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 DUX1O43812 170 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 LCMT2O60294 686 aaKnown RBP3.31□□□□□ -1.88
CNOT4-209ENST00000473470 JAK2O60674 1132 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 PIGRP01833 764 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 OPN1LWP04000 364 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 IGFBP1P08833 259 aaPredicted RBP3.31□□□□□ -1.88
CNOT4-209ENST00000473470 H2AFZP0C0S5 128 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 OR4Q2P0C623 313 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 PDHBP11177 359 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 SFTPCP11686 197 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 PSMA2P25787 234 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 HOXA9P31269 272 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 ALDH3B2P48448 385 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 TDO2P48775 406 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 ARHGDIBP52566 201 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 HSD17B7P56937 341 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 ERVPABLB-1P60509 514 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 OSTNP61366 133 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 RPL10AP62906 217 aaKnown RBP3.31□□□□□ -1.88
CNOT4-209ENST00000473470 ELP6Q0PNE2 266 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 RNF212Q495C1 297 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 DCST2Q5T1A1 773 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 UTF1Q5T230 341 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 ASPHD2Q6ICH7 369 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 STAC2Q6ZMT1 411 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 ANKRD37Q7Z713 158 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 GRAMD2AQ8IUY3 354 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 NANPQ8TBE9 248 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 MRAPQ8TCY5 172 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 TFB1MQ8WVM0 346 aaKnown RBP3.31□□□□□ -1.88
CNOT4-209ENST00000473470 RAB7BQ96AH8 199 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 TADA1Q96BN2 335 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 C19orf60Q96EN9 201 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 CPB2Q96IY4 423 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 MCCC1Q96RQ3 725 aaPredicted RBP3.31□□□□□ -1.88
CNOT4-209ENST00000473470 TPPP3Q9BW30 176 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 HCAR1Q9BXC0 346 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 OPN3Q9H1Y3 402 aaPredicted RBP3.31□□□□□ -1.88
CNOT4-209ENST00000473470 AZI2Q9H6S1 392 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 MEPEQ9NQ76 525 aaPredicted RBP3.31□□□□□ -1.88
CNOT4-209ENST00000473470 TIGARQ9NQ88 270 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.31□□□□□ -1.88
CNOT4-209ENST00000473470 RBM28Q9NW13 759 aaKnown RBP3.31□□□□□ -1.88
CNOT4-209ENST00000473470 EHFQ9NZC4 300 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 B4GALT7Q9UBV7 327 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 RP1P56715 2156 aa3.31□□□□□ -1.88
CNOT4-209ENST00000473470 MEGF8Q7Z7M0 2845 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 PPIAL4CA0A0B4J2A2 164 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 ZSCAN5CA6NGD5 496 aaPredicted RBP3.3□□□□□ -1.88
CNOT4-209ENST00000473470 SLC17A2O00624 439 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 SRPX2O60687 465 aaPredicted RBP3.3□□□□□ -1.88
CNOT4-209ENST00000473470 CSF2P04141 144 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 PPIAL4GP0DN37 164 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 EPB41P11171 864 aaKnown RBP3.3□□□□□ -1.88
CNOT4-209ENST00000473470 KRT13P13646 458 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 XRCC1P18887 633 aaPredicted RBP3.3□□□□□ -1.88
CNOT4-209ENST00000473470 GABRR2P28476 465 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 HNRNPH3P31942 346 aaKnown RBP3.3□□□□□ -1.88
CNOT4-209ENST00000473470 RPL4P36578 427 aaKnown RBP3.3□□□□□ -1.88
CNOT4-209ENST00000473470 OPRD1P41143 372 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 DUSP3P51452 185 aaPredicted RBP3.3□□□□□ -1.88
CNOT4-209ENST00000473470 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 LYZP61626 148 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 PLOD1Q02809 727 aaPredicted RBP3.3□□□□□ -1.88
CNOT4-209ENST00000473470 KLRB1Q12918 225 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 CAMK4Q16566 473 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 SLC36A3Q495N2 470 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 NADK2Q4G0N4 442 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 SLX4IPQ5VYV7 408 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 NCR3LG1Q68D85 454 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 SLC25A24Q6NUK1 477 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 GCNT7Q6ZNI0 430 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 HSD11B1LQ7Z5J1 315 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 ZNF540Q8NDQ6 660 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 VN1R17PQ8TDU5 208 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 DHTKD1Q96HY7 919 aaPredicted RBP3.3□□□□□ -1.88
CNOT4-209ENST00000473470 AKR1E2Q96JD6 320 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 C4orf36Q96KX1 117 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 RANBP9Q96S59 729 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 NFKBIZQ9BYH8 718 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 ELOVL2Q9NXB9 296 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 CGNQ9P2M7 1197 aaKnown RBP3.3□□□□□ -1.88
CNOT4-209ENST00000473470 PRODH2Q9UF12 536 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 KIF25-AS1Q9Y6Z4 181 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 PLXNA2O75051 1894 aa3.3□□□□□ -1.88
CNOT4-209ENST00000473470 NUP210Q8TEM1 1887 aaPredicted RBP3.3□□□□□ -1.88
CNOT4-209ENST00000473470 TDRD6O60522 2096 aaKnown RBP3.29□□□□□ -1.88
CNOT4-209ENST00000473470 ZBED9Q6R2W3 1325 aa3.29□□□□□ -1.88
CNOT4-209ENST00000473470 EFCAB7A8K855 629 aa3.29□□□□□ -1.88
CNOT4-209ENST00000473470 FAM220BPB1ANY3 271 aa3.29□□□□□ -1.88
CNOT4-209ENST00000473470 CPLX1O14810 134 aa3.29□□□□□ -1.88
CNOT4-209ENST00000473470 TRIM3O75382 744 aaPredicted RBP3.29□□□□□ -1.88
CNOT4-209ENST00000473470 STX11O75558 287 aa3.29□□□□□ -1.88
CNOT4-209ENST00000473470 PCCBP05166 539 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms