RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ARF1P84077 181 aaKnown RBP8.02□□□□□ -1.13
VCL-204ENST00000472585 EMX2Q04743 252 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 C3orf36Q3SXR2 165 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 C1QTNF12Q5T7M4 302 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 GPAT4Q86UL3 456 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 LRP11Q86VZ4 500 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 NATD1Q8N6N6 113 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 FAM169BQ8N8A8 192 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 OR8J2Q8NGG1 315 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 OR4A15Q8NGL6 344 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 CLDND2Q8NHS1 167 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 MAGEE2Q8TD90 523 aaPredicted RBP8.02□□□□□ -1.13
VCL-204ENST00000472585 EPS8L3Q8TE67 593 aaKnown RBP8.02□□□□□ -1.13
VCL-204ENST00000472585 PMM1Q92871 262 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 YIPF5Q969M3 257 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 DDIT4LQ96D03 193 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 TEX37Q96LM6 180 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 C16orf45Q96MC5 204 aaPredicted RBP8.02□□□□□ -1.13
VCL-204ENST00000472585 ZNF75AQ96N20 296 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 LRRC37BQ96QE4 947 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 RSPO3Q9BXY4 272 aaPredicted RBP8.02□□□□□ -1.13
VCL-204ENST00000472585 TPK1Q9H3S4 243 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 NARFLQ9H6Q4 476 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 ZNF442Q9H7R0 627 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 NOX3Q9HBY0 568 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 OBP2BQ9NPH6 170 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.02□□□□□ -1.13
VCL-204ENST00000472585 DDX28Q9NUL7 540 aaKnown RBP8.02□□□□□ -1.13
VCL-204ENST00000472585 EXD2Q9NVH0 621 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 TREM2Q9NZC2 230 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 SEC14L4Q9UDX3 406 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 PRSS51A0A1B0GVH4 220 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 FTCDNL1E5RQL4 147 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 FAAHO00519 579 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 RNASET2O00584 256 aaKnown RBP8.01□□□□□ -1.13
VCL-204ENST00000472585 ITM2AO43736 263 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 MSMBP08118 114 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 HKR1P10072 659 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 TCN1P20061 433 aaPredicted RBP8.01□□□□□ -1.13
VCL-204ENST00000472585 UQCRC2P22695 453 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 HTR3AP46098 478 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 EGR4Q05215 589 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 POU4F2Q12837 409 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 CASP8Q14790 479 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 COX20Q5RI15 118 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 PHYHD1Q5SRE7 291 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 MRPL2Q5T653 305 aaKnown RBP8.01□□□□□ -1.13
VCL-204ENST00000472585 NIPAL3Q6P499 406 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 BPIFB2Q8N4F0 458 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 OR4F15Q8NGB8 312 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 OR51F2Q8NH61 342 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 CKAP2Q8WWK9 683 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 OIT3Q8WWZ8 545 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 TUBGCP3Q96CW5 907 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 NEURL3Q96EH8 262 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 PPP1R36Q96LQ0 422 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 PRPF18Q99633 342 aaKnown RBP8.01□□□□□ -1.13
VCL-204ENST00000472585 MRPL37Q9BZE1 423 aaKnown RBP8.01□□□□□ -1.13
VCL-204ENST00000472585 AKTIPQ9H8T0 292 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 ESM1Q9NQ30 184 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 POLE3Q9NRF9 147 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 MED29Q9NX70 200 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 ASIC5Q9NY37 505 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 B3GNT2Q9NY97 397 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 MYEF2Q9P2K5 600 aaKnown RBP8.01□□□□□ -1.13
VCL-204ENST00000472585 B3GAT1Q9P2W7 334 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 WNK1Q9H4A3 2382 aa8.01□□□□□ -1.13
VCL-204ENST00000472585 CFAP73A6NFT4 308 aa8□□□□□ -1.13
VCL-204ENST00000472585 OR6C65A6NJZ3 312 aa8□□□□□ -1.13
VCL-204ENST00000472585 ZNF587BE7ETH6 402 aa8□□□□□ -1.13
VCL-204ENST00000472585 RPL36A-HNRNPH2H7BZ11 118 aa8□□□□□ -1.13
VCL-204ENST00000472585 NCR1O76036 304 aa8□□□□□ -1.13
VCL-204ENST00000472585 SEC14L2O76054 403 aa8□□□□□ -1.13
VCL-204ENST00000472585 ALX3O95076 343 aa8□□□□□ -1.13
VCL-204ENST00000472585 PNPP00491 289 aa8□□□□□ -1.13
VCL-204ENST00000472585 GPIP06744 558 aa8□□□□□ -1.13
VCL-204ENST00000472585 ARAFP10398 606 aa8□□□□□ -1.13
VCL-204ENST00000472585 ZFP36P26651 326 aaKnown RBP8□□□□□ -1.13
VCL-204ENST00000472585 CDKN2CP42773 168 aa8□□□□□ -1.13
VCL-204ENST00000472585 KHKP50053 298 aa8□□□□□ -1.13
VCL-204ENST00000472585 UBE2NP61088 152 aaKnown RBP8□□□□□ -1.13
VCL-204ENST00000472585 IL1RL1Q01638 556 aa8□□□□□ -1.13
VCL-204ENST00000472585 ROR2Q01974 943 aaKnown RBP8□□□□□ -1.13
VCL-204ENST00000472585 GPAT3Q53EU6 434 aa8□□□□□ -1.13
VCL-204ENST00000472585 TMEM225Q6GV28 225 aa8□□□□□ -1.13
VCL-204ENST00000472585 KRT80Q6KB66 452 aa8□□□□□ -1.13
VCL-204ENST00000472585 NHLRC1Q6VVB1 395 aa8□□□□□ -1.13
VCL-204ENST00000472585 MDP1Q86V88 176 aa8□□□□□ -1.13
VCL-204ENST00000472585 RNF130Q86XS8 419 aa8□□□□□ -1.13
VCL-204ENST00000472585 VRK2Q86Y07 508 aa8□□□□□ -1.13
VCL-204ENST00000472585 CLIP4Q8N3C7 705 aa8□□□□□ -1.13
VCL-204ENST00000472585 TRNT1Q96Q11 434 aaKnown RBP8□□□□□ -1.13
VCL-204ENST00000472585 SLC6A7Q99884 636 aa8□□□□□ -1.13
VCL-204ENST00000472585 PTDSS2Q9BVG9 487 aa8□□□□□ -1.13
VCL-204ENST00000472585 LINC00470Q9BZP3 86 aa8□□□□□ -1.13
VCL-204ENST00000472585 C20orf27Q9GZN8 174 aa8□□□□□ -1.13
VCL-204ENST00000472585 PIF1Q9H611 641 aa8□□□□□ -1.13
VCL-204ENST00000472585 GPR35Q9HC97 309 aa8□□□□□ -1.13
VCL-204ENST00000472585 DYNLRB1Q9NP97 96 aa8□□□□□ -1.13
VCL-204ENST00000472585 ADPRHL2Q9NX46 363 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms