RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 LCN1P1Q5VSP4 162 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 TUBA3EQ6PEY2 450 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 VASH2Q86V25 355 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 JAZF1Q86VZ6 243 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 GALNT16Q8N428 558 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 NANOGP1Q8N7R0 232 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 ADPRHL1Q8NDY3 354 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 SDR9C7Q8NEX9 313 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 PROKR2Q8NFJ6 384 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 OR4K13Q8NH42 304 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 ZNF417Q8TAU3 575 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 PTP4A1Q93096 173 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 OTULINQ96BN8 352 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 SLC25A36Q96CQ1 311 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 RASD2Q96D21 266 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 YIPF6Q96EC8 236 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 DTNBP1Q96EV8 351 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 ARL5BQ96KC2 179 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 TSPAN32Q96QS1 320 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 SNX18Q96RF0 628 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 ZNF587Q96SQ5 575 aaPredicted RBP8.46□□□□□ -1.06
VPS52-216ENST00000471309 DDOQ99489 341 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 BCL7BQ9BQE9 202 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 FUNDC2Q9BWH2 189 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 NMNAT2Q9BZQ4 307 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 MED20Q9H944 212 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 FANCFQ9NPI8 374 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 INIPQ9NRY2 104 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 ANKRD10Q9NXR5 420 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 HAO2Q9NYQ3 351 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 TAS2R5Q9NYW4 299 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 PTTG2Q9NZH5 202 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 LRFN1Q9P244 771 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 GRHPRQ9UBQ7 328 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 ENPP5Q9UJA9 477 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 DKKL1Q9UK85 242 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 SPEGQ15772 3267 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 FRYLO94915 3013 aa8.46□□□□□ -1.06
VPS52-216ENST00000471309 A0A0G2JMM0 328 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 A0A1W2PNV4 684 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 A0A1W2PPB8 328 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 A0A1W2PRS3 328 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 TRIM64BA6NI03 449 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 ARGFXA6NJG6 315 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 KIR3DP1A8MWS1 328 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 H3BML4 177 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 H3BMQ9 156 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 J3QRE1 110 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 RNF13O43567 381 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 EFNA2O43921 213 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 NEURL1O76050 574 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 GABARAPO95166 117 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 OR6A2O95222 327 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 F13BP05160 661 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 TFPIP10646 304 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 IMPDH2P12268 514 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 CNR1P21554 472 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 TGFBR2P37173 567 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 CD96P40200 585 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 SLC25A1P53007 311 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 RPS7P62081 194 aaKnown RBP8.45□□□□□ -1.06
VPS52-216ENST00000471309 LGALS3BPQ08380 585 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 ZP4Q12836 540 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 MYBPHQ13203 477 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 CLN3Q13286 438 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 C1DQ13901 141 aaKnown RBP8.45□□□□□ -1.06
VPS52-216ENST00000471309 SPHARQ15513 63 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 MED22Q15528 200 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 OR7A5Q15622 319 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 ZNF239Q16600 458 aaKnown RBP8.45□□□□□ -1.06
VPS52-216ENST00000471309 TBC1D25Q3MII6 688 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 MESTQ5EB52 335 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 SLC35D3Q5M8T2 416 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 ATP1A1-AS1Q5TC04 95 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 SLC16A12Q6ZSM3 486 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 H1FNTQ75WM6 255 aaPredicted RBP8.45□□□□□ -1.06
VPS52-216ENST00000471309 ADCK1Q86TW2 530 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 P2RY8Q86VZ1 359 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 ANKRD13BQ86YJ7 626 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 ARIH2OSQ8N7S6 290 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 POMGNT2Q8NAT1 580 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 CYB561A3Q8NBI2 242 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 NPEPL1Q8NDH3 523 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 ZNF519Q8TB69 540 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 C12orf43Q96C57 262 aaKnown RBP8.45□□□□□ -1.06
VPS52-216ENST00000471309 Q96M85 177 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 JSRP1Q96MG2 331 aaPredicted RBP8.45□□□□□ -1.06
VPS52-216ENST00000471309 COG8Q96MW5 612 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 GNRHR2Q96P88 292 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 NMNAT3Q96T66 252 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 TEAD3Q99594 435 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 FAM173AQ9BQD7 235 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 RNF32Q9H0A6 362 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 CHST11Q9NPF2 352 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 INPP5EQ9NRR6 644 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 CHCHD3Q9NX63 227 aaKnown RBP8.45□□□□□ -1.06
VPS52-216ENST00000471309 TNFRSF10DQ9UBN6 386 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 SEC14L4Q9UDX3 406 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 BOKQ9UMX3 212 aaPredicted RBP8.45□□□□□ -1.06
VPS52-216ENST00000471309 B3GALT5Q9Y2C3 310 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms