RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 EBPLQ9BY08 206 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 FAM107BQ9H098 131 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 OR51B5Q9H339 312 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 LRRN3Q9H3W5 708 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 TUBB1Q9H4B7 451 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 AKIRIN1Q9H9L7 192 aaPredicted RBP3.4□□□□□ -1.87
COL9A1-206ENST00000470652 SYTL2Q9HCH5 934 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 MID1IP1Q9NPA3 183 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 FGFR1OP2Q9NVK5 253 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 DCDC2Q9UHG0 476 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 POMT2Q9UKY4 750 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ZNF490Q9ULM2 529 aaPredicted RBP3.4□□□□□ -1.87
COL9A1-206ENST00000470652 MOB4Q9Y3A3 225 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 CSNK1G3Q9Y6M4 447 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 SEC16AO15027 2179 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 NUP210LQ5VU65 1888 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 KNTC1P50748 2209 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 A0A1B0GVY2 172 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 D6RAR5 112 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 H0YGG7 62 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 K7EPI3 171 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 CLDN4O14493 209 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 FLRT2O43155 660 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 OR1F1O43749 312 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 SMIM24O75264 130 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 CSO75390 466 aaKnown RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 STK16O75716 305 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 PDYNP01213 254 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 IGHEP01854 428 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 CAPN1P07384 714 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 GSTA1P08263 222 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 ANXA5P08758 320 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 RBP1P09455 135 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 LINC00032P0C843 101 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 THRAP10827 490 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 IMPDH1P20839 514 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 ACP1P24666 158 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 MDH1P40925 334 aaKnown RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 GABRA4P48169 554 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 SLC1A6P48664 564 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 NOVA1P51513 510 aaKnown RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 LIMK1P53667 647 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 TMEM50BP56557 158 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 NME5P56597 212 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 VSX2P58304 361 aaPredicted RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 DSCR10P59022 87 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 RAB8AP61006 207 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 ABCE1P61221 599 aaKnown RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 GNGT1P63211 74 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 CBX1P83916 185 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 TRAP1Q12931 704 aaKnown RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 CHIT1Q13231 466 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 RCN2Q14257 317 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 ABRAXAS2Q15018 415 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 NPTX1Q15818 432 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 PDK4Q16654 411 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 GLIPR1L2Q4G1C9 344 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 HES3Q5TGS1 186 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 C1orf189Q5VU69 101 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 OR4A47Q6IF82 309 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 SULT1C3Q6IMI6 304 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 ANKRD26P1Q6NSI1 321 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 SPESP1Q6UW49 350 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 SHISA6Q6ZSJ9 500 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 CENPVQ7Z7K6 275 aaPredicted RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 PAQR7Q86WK9 346 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 OOSP2Q86WS3 158 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 SLC37A3Q8NCC5 494 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 OR5T3Q8NGG3 340 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 OR10Q1Q8NGQ4 319 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 CLHC1Q8NHS4 586 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 RHEBL1Q8TAI7 183 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 MCOLN3Q8TDD5 553 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 UBTD2Q8WUN7 234 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 CKAP2Q8WWK9 683 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 SLC5A11Q8WWX8 675 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 SMPDL3AQ92484 453 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 RAD51AP1Q96B01 352 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 L3HYPDHQ96EM0 354 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 CABS1Q96KC9 395 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 FOPNLQ96NB1 174 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 OR52B2Q96RD2 323 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 IQCGQ9H095 443 aaKnown RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 WDR55Q9H6Y2 383 aaPredicted RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 MED20Q9H944 212 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 MRPS30Q9NP92 439 aaKnown RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 CCDC177Q9NQR7 707 aaPredicted RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 DNAJC11Q9NVH1 559 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 TEX10Q9NXF1 929 aaPredicted RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 NKIRAS1Q9NYS0 192 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 OPTCQ9UBM4 332 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 KLK13Q9UKR3 277 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 COLEC10Q9Y6Z7 277 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 MN1Q10571 1320 aaPredicted RBP3.39□□□□□ -1.87
COL9A1-206ENST00000470652 LAMA5O15230 3695 aa3.39□□□□□ -1.87
COL9A1-206ENST00000470652 EML6Q6ZMW3 1958 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 TNRC6AQ8NDV7 1962 aaKnown RBP3.38□□□□□ -1.87
COL9A1-206ENST00000470652 ZZEF1O43149 2961 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 MGAQ8IWI9 3026 aa3.38□□□□□ -1.87
COL9A1-206ENST00000470652 A0A0J9YY10 115 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms