RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ZNF43P17038 809 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 GTF2E2P29084 291 aaKnown RBP11.55□□□□□ -0.56
CPSF4-210ENST00000469897 CALCRP30988 508 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 PDLIM4P50479 330 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 NAAAQ02083 359 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 C1DQ13901 141 aaKnown RBP11.55□□□□□ -0.56
CPSF4-210ENST00000469897 GGTLC2Q14390 218 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 ADIPOQQ15848 244 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 CARTPTQ16568 116 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 FUNDC1Q8IVP5 155 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 MSRB3Q8IXL7 192 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 C10orf111Q8N326 155 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 ARIH2OSQ8N7S6 290 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 ANKS4BQ8N8V4 417 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 NFKBIDQ8NI38 313 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 BBS10Q8TAM1 723 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 TLCD1Q96CP7 247 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 ZNF837Q96EG3 531 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-210ENST00000469897 OXGR1Q96P68 337 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 KATNB1Q9BVA0 655 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 LINC00470Q9BZP3 86 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 NELFAQ9H3P2 528 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 SEC61A2Q9H9S3 476 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 CA10Q9NS85 328 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 SLC25A37Q9NYZ2 338 aa11.55□□□□□ -0.56
CPSF4-210ENST00000469897 A0A1B0GWA3 101 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 VWC2LB2RUY7 222 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 B9A039 149 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 OR2T1O43869 369 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 SLC43A1O75387 559 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 ZNF432O94892 652 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 CSF3P09919 207 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 CECR9P0C854 216 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 FAM157CP0CG43 387 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 BMP2P12643 396 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 ETS2P15036 469 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 CBR1P16152 277 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 HOXB9P17482 250 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-210ENST00000469897 PAX7P23759 505 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 NR4A2P43354 598 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 SNRPD2P62316 118 aaKnown RBP11.54□□□□□ -0.56
CPSF4-210ENST00000469897 IL1RL1Q01638 556 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 HGFACQ04756 655 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 GLIPR1L2Q4G1C9 344 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 PAGE3Q5JUK9 113 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 BLOC1S3Q6QNY0 202 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 H1FNTQ75WM6 255 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-210ENST00000469897 SLC46A3Q7Z3Q1 461 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 COMTD1Q86VU5 262 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 PHC2Q8IXK0 858 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 GOLGA6L1Q8N7Z2 621 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 LSMEM1Q8N8F7 131 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 RNF217Q8TC41 542 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 MAGEE2Q8TD90 523 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-210ENST00000469897 RAD21L1Q9H4I0 556 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 GPR35Q9HC97 309 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 B3GAT1Q9P2W7 334 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 CRNNQ9UBG3 495 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-210ENST00000469897 CDC42EP3Q9UKI2 254 aa11.54□□□□□ -0.56
CPSF4-210ENST00000469897 TLN2Q9Y4G6 2542 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 MS4A18H0YCH9 400 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 RPL36A-HNRNPH2H7BZ11 118 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 M0R082 166 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 LMX1BO60663 402 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 IGLV1-44P01699 117 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 CELA3BP08861 270 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 HOXB1P14653 301 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-210ENST00000469897 HTR2AP28223 471 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 GRPRP30550 384 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 PRKAR1BP31321 381 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 IDH3AP50213 366 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 STX1BP61266 288 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 CDK6Q00534 326 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 FADDQ13158 208 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 CEACAM16Q2WEN9 425 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 MS4A18Q3C1V0 323 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 ALG10BQ5I7T1 473 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 PHYHD1Q5SRE7 291 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 FAM69AQ5T7M9 428 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 REEP3Q6NUK4 255 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 NET1Q7Z628 596 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-210ENST00000469897 GPR137CQ8N3F9 429 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 ZNF417Q8TAU3 575 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 TMEM158Q8WZ71 300 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 SLC35B4Q969S0 331 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 ZNF317Q96PQ6 595 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-210ENST00000469897 ZNF587Q96SQ5 575 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-210ENST00000469897 EBF4Q9BQW3 602 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 PIMREGQ9BSJ6 248 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 SHARPINQ9H0F6 387 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 CRLF2Q9HC73 371 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 SLC52A3Q9NQ40 469 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 TCF7L2Q9NQB0 619 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 TMEM160Q9NX00 188 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 CCDC167Q9P0B6 97 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 RCE1Q9Y256 329 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 FKBP7Q9Y680 259 aa11.53□□□□□ -0.56
CPSF4-210ENST00000469897 IGKV1D-42A0A075B6H8 117 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 TRAV36DV7A0A075B6V5 113 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 LOC100289279A0A1B0GTE1 492 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms