RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 CAMK2DQ13557 499 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 HES5Q5TA89 166 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 ZNF836Q6ZNA1 936 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 SLC35D2Q76EJ3 337 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 LMF1Q96S06 567 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 CENPOQ9BU64 300 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 ZNF281Q9Y2X9 895 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 PCDHGA6Q9Y5G7 932 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 MCM3APO60318 1980 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 LOC105369274A0A096LPK9 316 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 CREBL2O60519 120 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-213ENST00000469300 TOXO94900 526 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 DUSP8Q13202 625 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 GAB1Q13480 694 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 AGAP6Q5VW22 663 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 OR4N4Q8N0Y3 316 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 TEX19Q8NA77 164 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 STEAP2Q8NFT2 490 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 CD300LFQ8TDQ1 290 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 GGHQ92820 318 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 TEX37Q96LM6 180 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 AGAP4Q96P64 663 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 BEX1Q9HBH7 125 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 UBE2J1Q9Y385 318 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-213ENST00000469300 TMEM212A6NML5 194 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 SLC1A3P43003 542 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 HTR5AP47898 357 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 AIMP2Q13155 320 aaKnown RBP13.9□□□□□ -0.18
LIMS2-213ENST00000469300 MARCH3Q86UD3 253 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 DNAJC22Q8N4W6 341 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 ST8SIA1Q92185 356 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 CNOT9Q92600 299 aaKnown RBP13.9□□□□□ -0.18
LIMS2-213ENST00000469300 SLC25A44Q96H78 314 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-213ENST00000469300 CCDC74BQ96LY2 380 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 ERVK13-1Q9NX77 482 aa13.9□□□□□ -0.18
LIMS2-213ENST00000469300 TTC3P53804 2025 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 ZNF587BE7ETH6 402 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 SULT1B1O43704 296 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 BCAS1O75363 584 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-213ENST00000469300 DAPP51397 102 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 OR7E24Q6IFN5 339 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 FAM198BQ6UWH4 519 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 ASCC3Q8N3C0 2202 aaKnown RBP13.89□□□□□ -0.19
LIMS2-213ENST00000469300 SLC16A6O15403 523 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 IL1AP01583 271 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 SDHBP21912 280 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 PNLIPRP2P54317 469 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 GFERP55789 205 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 LEXMQ3ZCV2 418 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 DESI1Q6ICB0 168 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 B3GNT8Q7Z7M8 397 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 GOT1L1Q8NHS2 421 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-213ENST00000469300 CHPT1Q8WUD6 406 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 PHYHIPQ92561 330 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 WDR76Q9H967 626 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 AK6Q9Y3D8 172 aaKnown RBP13.89□□□□□ -0.19
LIMS2-213ENST00000469300 CEPT1Q9Y6K0 416 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 C7orf72A4D263 438 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 F5H0A9 414 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-213ENST00000469300 ARHGAP33O14559 1287 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 LPLP06858 475 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 MPLP40238 635 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 FOXK2Q01167 660 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 SLX4IPQ5VYV7 408 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 TSSK4Q6SA08 328 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 SH2D5Q6ZV89 423 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 PIWIL3Q7Z3Z3 882 aaKnown RBP13.89□□□□□ -0.19
LIMS2-213ENST00000469300 NUDT8Q8WV74 236 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 RRNAD1Q96FB5 475 aaKnown RBP13.89□□□□□ -0.19
LIMS2-213ENST00000469300 TAAR9Q96RI9 348 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 CDX2Q99626 313 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-213ENST00000469300 NUDT22Q9BRQ3 303 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 LAT2Q9GZY6 243 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 ZNF700Q9H0M5 742 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 TUBGCP6Q96RT7 1819 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 WNK3Q9BYP7 1800 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 CDHR4A6H8M9 788 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 IFNGR1P15260 489 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 PSMB10P40306 273 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 FGL1Q08830 312 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 TMEM102Q8N9M5 508 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-213ENST00000469300 DNAAF1Q8NEP3 725 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 OR5H6Q8NGV6 325 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 TTC9Q92623 222 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 KCTD12Q96CX2 325 aaKnown RBP13.89□□□□□ -0.19
LIMS2-213ENST00000469300 DYNLRB1Q9NP97 96 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 SNX11Q9Y5W9 270 aa13.89□□□□□ -0.19
LIMS2-213ENST00000469300 OR6C65A6NJZ3 312 aa13.88□□□□□ -0.19
LIMS2-213ENST00000469300 ZNF814B7Z6K7 855 aa13.88□□□□□ -0.19
LIMS2-213ENST00000469300 MEN1O00255 615 aa13.88□□□□□ -0.19
LIMS2-213ENST00000469300 SGCEO43556 437 aa13.88□□□□□ -0.19
LIMS2-213ENST00000469300 BIDP55957 195 aa13.88□□□□□ -0.19
LIMS2-213ENST00000469300 EMX1Q04741 257 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-213ENST00000469300 VWA2Q5GFL6 755 aa13.88□□□□□ -0.19
LIMS2-213ENST00000469300 BEND4Q6ZU67 534 aa13.88□□□□□ -0.19
LIMS2-213ENST00000469300 FBXL6Q8N531 539 aa13.88□□□□□ -0.19
LIMS2-213ENST00000469300 CSNK2A3Q8NEV1 391 aa13.88□□□□□ -0.19
LIMS2-213ENST00000469300 GCDHQ92947 438 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-213ENST00000469300 CCDC120Q96HB5 630 aa13.88□□□□□ -0.19
LIMS2-213ENST00000469300 LRFN5Q96NI6 719 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms