RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 B3GNT6Q6ZMB0 384 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 FAM122BQ7Z309 247 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 LSM14AQ8ND56 463 aaKnown RBP17.12■□□□□ 0.33
SMC4-209ENST00000468653 OR4F15Q8NGB8 312 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 OR9Q1Q8NGQ5 310 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 ZNF417Q8TAU3 575 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 COG8Q96MW5 612 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 OR5M11Q96RB7 305 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 ZNF587Q96SQ5 575 aaPredicted RBP17.12■□□□□ 0.33
SMC4-209ENST00000468653 TEAD3Q99594 435 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 UTP23Q9BRU9 249 aaKnown RBP17.12■□□□□ 0.33
SMC4-209ENST00000468653 INIPQ9NRY2 104 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 MRPL39Q9NYK5 338 aaKnown RBP17.12■□□□□ 0.33
SMC4-209ENST00000468653 LRFN1Q9P244 771 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 TNFRSF10DQ9UBN6 386 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 EXOGQ9Y2C4 368 aaKnown RBP17.12■□□□□ 0.33
SMC4-209ENST00000468653 RPH3AQ9Y2J0 694 aaPredicted RBP17.12■□□□□ 0.33
SMC4-209ENST00000468653 EXOSC1Q9Y3B2 195 aaKnown RBP17.12■□□□□ 0.33
SMC4-209ENST00000468653 CORINQ9Y5Q5 1042 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 DOCK10Q96BY6 2186 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 FTCDNL1E5RQL4 147 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 TRIM3O75382 744 aaPredicted RBP17.11■□□□□ 0.33
SMC4-209ENST00000468653 GSTT1P30711 240 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 CD96P40200 585 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 ETV1P50549 477 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 NHLH1Q02575 133 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 EMC4Q5J8M3 183 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 GPR139Q6DWJ6 353 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 GHDCQ8N2G8 530 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 NANOGP1Q8N7R0 232 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 NPEPL1Q8NDH3 523 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 PROKR2Q8NFJ6 384 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 OR51G2Q8NGK0 314 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 RAB2BQ8WUD1 216 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 YIPF6Q96EC8 236 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 TMEM185BQ9H7F4 350 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 TIMMDC1Q9NPL8 285 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 CPAMD8Q8IZJ3 1885 aa17.11■□□□□ 0.33
SMC4-209ENST00000468653 CCDC182A6NF36 153 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 H3BMQ9 156 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 PLPP3O14495 311 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 TXNDC12O95881 172 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 GYPBP06028 91 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 SLC2A5P22732 501 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 DBPQ10586 325 aaPredicted RBP17.1■□□□□ 0.33
SMC4-209ENST00000468653 SELENBP1Q13228 472 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 C1DQ13901 141 aaKnown RBP17.1■□□□□ 0.33
SMC4-209ENST00000468653 ARMCX4Q5H9R4 360 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 LEG1Q6P5S2 330 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 ZNF227Q86WZ6 799 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 ANKRD13BQ86YJ7 626 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 GTPBP8Q8N3Z3 284 aaPredicted RBP17.1■□□□□ 0.33
SMC4-209ENST00000468653 SLC25A43Q8WUT9 341 aaPredicted RBP17.1■□□□□ 0.33
SMC4-209ENST00000468653 DOK1Q99704 481 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 A0A0G2JMM0 328 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 A0A1W2PPB8 328 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 A0A1W2PRS3 328 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 ARGFXA6NJG6 315 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 KIR3DP1A8MWS1 328 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 CD36P16671 472 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 CNR1P21554 472 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 PTPRZ1P23471 2315 aaPredicted RBP17.1■□□□□ 0.33
SMC4-209ENST00000468653 FKBP2P26885 142 aaKnown RBP17.1■□□□□ 0.33
SMC4-209ENST00000468653 RRADP55042 308 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 LGALS3BPQ08380 585 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 RTP5Q14D33 572 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 TOMM20Q15388 145 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 SPHARQ15513 63 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 SPINK14Q6IE38 97 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 PAQR6Q6TCH4 344 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 LINC00696Q6ZRV3 163 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 THAP4Q8WY91 577 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 KISS1RQ969F8 398 aaPredicted RBP17.1■□□□□ 0.33
SMC4-209ENST00000468653 TSPAN32Q96QS1 320 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 MGLLQ99685 303 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 PTTG2Q9NZH5 202 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 ENPP5Q9UJA9 477 aa17.1■□□□□ 0.33
SMC4-209ENST00000468653 ZNF346Q9UL40 294 aaKnown RBP17.1■□□□□ 0.33
SMC4-209ENST00000468653 LIPT2A6NK58 231 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 OPN1LWP04000 364 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 PRKAR1AP10644 381 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 IMPDH2P12268 514 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 LIPAP38571 399 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 CDKN2AP42771 156 aaKnown RBP17.09■□□□□ 0.33
SMC4-209ENST00000468653 GPR85P60893 370 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 MYBPHQ13203 477 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 CAMK2BQ13554 666 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 KRR1Q13601 381 aaKnown RBP17.09■□□□□ 0.33
SMC4-209ENST00000468653 GLYR1Q49A26 553 aaPredicted RBP17.09■□□□□ 0.33
SMC4-209ENST00000468653 RAET1LQ5VY80 246 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 TUBA3EQ6PEY2 450 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 H1FNTQ75WM6 255 aaPredicted RBP17.09■□□□□ 0.33
SMC4-209ENST00000468653 P2RY8Q86VZ1 359 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 GALNT16Q8N428 558 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 SCAIQ8N9R8 606 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 ZNF248Q8NDW4 579 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 OR5B2Q96R09 309 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 UBL7Q96S82 380 aaPredicted RBP17.09■□□□□ 0.33
SMC4-209ENST00000468653 DDOQ99489 341 aa17.09■□□□□ 0.33
SMC4-209ENST00000468653 TSC22D3Q99576 134 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms