RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 OTUB2Q96DC9 234 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 ZNF597Q96LX8 424 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 CSPG4P5Q96PW8 444 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 EGFL8Q99944 293 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 FERMT1Q9BQL6 677 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 MRPL45Q9BRJ2 306 aaKnown RBP4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 ZNF717Q9BY31 904 aaPredicted RBP4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 DERL2Q9GZP9 239 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 RACGAP1Q9H0H5 632 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 ALX4Q9H161 411 aaPredicted RBP4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 SLC26A1Q9H2B4 701 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 RHBGQ9H310 441 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 SMYD3Q9H7B4 428 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 ZNF696Q9H7X3 374 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 CSNK1G1Q9HCP0 422 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 MRPL47Q9HD33 250 aaKnown RBP4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 TIGARQ9NQ88 270 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 GSN-AS1Q9NRJ2 163 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 PARVAQ9NVD7 372 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 FAM120CQ9NX05 1096 aaKnown RBP4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 PSMC3IPQ9P2W1 217 aaPredicted RBP4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 APOBEC3BQ9UH17 382 aaKnown RBP4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 AURKCQ9UQB9 309 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 PLLPQ9Y342 182 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 V9GYQ6 96 aa4.34□□□□□ -1.71
CACNA1C-223ENST00000465278 ANAPC1Q9H1A4 1944 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 MTMR11A4FU01 709 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 IQCF5A8MTL0 148 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 ZNF487B1APH4 448 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 PGRMC2O15173 223 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 GMDSO60547 372 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 SPAG6O75602 509 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 ATP6AP2O75787 350 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 DCTN3O75935 186 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 DFFBO76075 338 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 EML2O95834 649 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 CALCAP01258 141 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 GBAP04062 536 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 KRT8P05787 483 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 LYNP07948 512 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 OR4E1P0C645 316 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 STAG3L3P0CL85 134 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 SMIM6P0DI80 62 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 TPBGLP0DKB5 382 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 MLNP12872 115 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 GNB3P16520 340 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 ITIH1P19827 911 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 LHCGRP22888 699 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 LMO2P25791 158 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 S100PP25815 95 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 HMGCLP35914 325 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 HSD17B3P37058 310 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 NSFP46459 744 aaKnown RBP4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 FHITP49789 147 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 SERPINB9P50453 376 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 RIDAP52758 137 aaKnown RBP4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 HERV-K104P61576 105 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 TNNC1P63316 161 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 DLK1P80370 383 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 OGDHQ02218 1023 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 CKAP4Q07065 602 aaKnown RBP4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 CHIT1Q13231 466 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 PON3Q15166 354 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 RPS6KA1Q15418 735 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 ZNF630Q2M218 657 aaPredicted RBP4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 VWA2Q5GFL6 755 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 GLRA4Q5JXX5 417 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 SLC35D3Q5M8T2 416 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 SPATA46Q5T0L3 261 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 MPP7Q5T2T1 576 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 PYHIN1Q6K0P9 492 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 EMBQ6PCB8 327 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 C5orf46Q6UWT4 87 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 BHLHA15Q7RTS1 189 aaPredicted RBP4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 DCXRQ7Z4W1 244 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 METTL23Q86XA0 190 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 GID4Q8IVV7 300 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 SLC43A2Q8N370 569 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 ZNF781Q8N8C0 355 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 CCDC197Q8NCU1 140 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 OR5T2Q8NGG2 359 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 SLCO2A1Q92959 643 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 OMA1Q96E52 524 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 ZNF486Q96H40 463 aaPredicted RBP4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 ELMO2Q96JJ3 720 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 SENP8Q96LD8 212 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 C9orf72Q96LT7 481 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 CPXM1Q96SM3 734 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 ACBD6Q9BR61 282 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 CNPY3Q9BT09 278 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 PAPOLGQ9BWT3 736 aaKnown RBP4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 ZYG11BQ9C0D3 744 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 PIGUQ9H490 435 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 NMUR1Q9HB89 426 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 SLC35D1Q9NTN3 355 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 DNAJC17Q9NVM6 304 aaKnown RBP4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 KLHL28Q9NXS3 571 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 ADAM22Q9P0K1 906 aa4.33□□□□□ -1.72
CACNA1C-223ENST00000465278 ADAM28Q9UKQ2 775 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms