RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ARCQ7LC44 396 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 ASCL5Q7RTU5 278 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 PLCZ1Q86YW0 608 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 GPC2Q8N158 579 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 ARHGAP18Q8N392 663 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 CSNK1A1LQ8N752 337 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 C8orf31Q8N9H6 132 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 B3GNT7Q8NFL0 401 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 OR4F6Q8NGB9 312 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 OR52I1Q8NGK6 324 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 C8orf46Q8TAG6 207 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 TCP10LQ8TDR4 215 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 HTR3CQ8WXA8 447 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 NAT6Q93015 286 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 PNPLA2Q96AD5 504 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 NUS1Q96E22 293 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 CAPNS2Q96L46 248 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 TUBGCP2Q9BSJ2 902 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 CNPY3Q9BT09 278 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 POTEKPQ9BYX7 375 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 RACGAP1Q9H0H5 632 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 LRRC19Q9H756 370 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 C3orf14Q9HBI5 128 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 NMRAL1Q9HBL8 299 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 ABCB10Q9NRK6 738 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 MRPL39Q9NYK5 338 aaKnown RBP3.16□□□□□ -1.9
ITGB1-208ENST00000464001 NKIRAS1Q9NYS0 192 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 CLN8Q9UBY8 286 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 DCDC2Q9UHG0 476 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 PURGQ9UJV8 347 aaKnown RBP3.16□□□□□ -1.9
ITGB1-208ENST00000464001 ELF5Q9UKW6 265 aaPredicted RBP3.16□□□□□ -1.9
ITGB1-208ENST00000464001 PEX16Q9Y5Y5 336 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 ALG6Q9Y672 507 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 GRIN2DO15399 1336 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 NEDD4P46934 1319 aa3.16□□□□□ -1.9
ITGB1-208ENST00000464001 A0A087WZ39 114 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 A8MUA0 341 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 G3V2L1 256 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 SMLR1H3BR10 107 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 CYB561D2O14569 222 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 SURF4O15260 269 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 MSH4O15457 936 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 CHST1O43916 411 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 HUS1O60921 280 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 ENTPD5O75356 428 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 FCN3O75636 299 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 OAS1P00973 400 aaKnown RBP3.15□□□□□ -1.91
ITGB1-208ENST00000464001 H2BFMP0C1H6 154 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 PNMA6AP0CW24 399 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-208ENST00000464001 MYOGP15173 224 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 HOXB8P17481 243 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-208ENST00000464001 GNA11P29992 359 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 FEN1P39748 380 aaKnown RBP3.15□□□□□ -1.91
ITGB1-208ENST00000464001 NPBWR2P48146 333 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 RFX3P48380 749 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 RAB10P61026 200 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 CSNK1G2P78368 415 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 PLOD1Q02809 727 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-208ENST00000464001 RGS1Q08116 209 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 SLAMF1Q13291 335 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 CYLC2Q14093 348 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-208ENST00000464001 MAPRE2Q15555 327 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 PSG3Q16557 428 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 SLC5A12Q1EHB4 618 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 ISXQ2M1V0 245 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 FGD3Q5JSP0 725 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 BEND3Q5T5X7 828 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 GPR107Q5VW38 600 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 C22orf42Q6IC83 251 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 Q6ZSR3 168 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 TPGS1Q6ZTW0 290 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 SLC16A14Q7RTX9 510 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 PID1Q7Z2X4 250 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 ABHD12BQ7Z5M8 362 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-208ENST00000464001 CCDC50Q8IVM0 306 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 CDKL3Q8IVW4 592 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-208ENST00000464001 ZNF100Q8IYN0 542 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 LRRC34Q8IZ02 419 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 SLC34A3Q8N130 599 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 C17orf78Q8N4C9 275 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 CCDC185Q8N715 623 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 PLPPR1Q8TBJ4 325 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 GTF2H4Q92759 462 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 CCDC124Q96CT7 223 aaKnown RBP3.15□□□□□ -1.91
ITGB1-208ENST00000464001 FAM122AQ96E09 287 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 PLEKHA8Q96JA3 519 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 SERAC1Q96JX3 654 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 GLT1D1Q96MS3 346 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 CSPG4P5Q96PW8 444 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 CNN2Q99439 309 aaKnown RBP3.15□□□□□ -1.91
ITGB1-208ENST00000464001 MAPKAP1Q9BPZ7 522 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 SLC30A2Q9BRI3 323 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 NAT9Q9BTE0 207 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 ANGPTL4Q9BY76 406 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 PARD6GQ9BYG4 376 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-208ENST00000464001 SHCBP1LQ9BZQ2 653 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 PPA2Q9H2U2 334 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 VCX3BQ9H321 246 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 OR51M1Q9H341 326 aa3.15□□□□□ -1.91
ITGB1-208ENST00000464001 FNDC4Q9H6D8 234 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms