RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 TIGITQ495A1 244 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 HSP90B2PQ58FF3 399 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 DMRTC1Q5HYR2 192 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 DCST2Q5T1A1 773 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 SLC8B1Q6J4K2 584 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 UTS2BQ765I0 119 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 VTCN1Q7Z7D3 282 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 SCD5Q86SK9 330 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 ERICH1Q86X53 443 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 Q8NBF4 154 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 LINC00301Q8NCQ3 95 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 OR4D9Q8NGE8 314 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 OR4Q3Q8NH05 313 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 FLVCR1-AS1Q8TAF5 88 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 MAGEE2Q8TD90 523 aaPredicted RBP2.39□□□□□ -2.03
HPS3-203ENST00000460822 SGK3Q96BR1 496 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 ZNF597Q96LX8 424 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 OR5B2Q96R09 309 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 ANKRD60Q9BZ19 345 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 MRPL37Q9BZE1 423 aaKnown RBP2.39□□□□□ -2.03
HPS3-203ENST00000460822 FAM107BQ9H098 131 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 GLIPR2Q9H4G4 154 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 ANKRD19PQ9H560 264 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 NMRAL1Q9HBL8 299 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 POPDC2Q9HBU9 364 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 AGPAT3Q9NRZ7 376 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 PTTG3PQ9NZH4 202 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 NUDT4Q9NZJ9 180 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 PRODH2Q9UF12 536 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 RNF24Q9Y225 148 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 CARMIL3Q8ND23 1372 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 CEMIPQ8WUJ3 1361 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 FER1L5A0AVI2 2057 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 CDHR2Q9BYE9 1310 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 C5P01031 1676 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 RFX7Q2KHR2 1363 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 LOC100653049A0A140TA62 436 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 RPL37AP8A6NKH3 93 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ZNF701M0R085 212 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 WWP2O00308 870 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 RGS16O15492 202 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 RS1O15537 224 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ATP5LO75964 103 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 KRT34O76011 436 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 TMEM50AO95807 157 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 SNRPCP09234 159 aaKnown RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 CFC1BP0CG36 223 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 CFC1P0CG37 223 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 CCNB1P14635 433 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 IDSP22304 550 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 IGFBP5P24593 272 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 LMO2P25791 158 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ANXA13P27216 316 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 GNA11P29992 359 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 CDH5P33151 784 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 QARSP47897 775 aaKnown RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 STARP49675 285 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 GSK3BP49841 420 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 BCAP31P51572 246 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 MNAT1P51948 309 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 DAOAP59103 153 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 RND3P61587 244 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 RAB11AP62491 216 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ZNF154Q13106 437 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 VGLL4Q14135 290 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 DPYSL3Q14195 570 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 STK38Q15208 465 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 RAB11BQ15907 218 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 NDUFA9Q16795 377 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 CYP51A1Q16850 503 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ZNF57Q68EA5 555 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 HSDL2Q6YN16 418 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 SSX9Q7RTT3 188 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 LRRTM1Q86UE6 522 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ERI1Q8IV48 349 aaKnown RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 FBXL16Q8N461 479 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 KIR3DL3Q8N743 410 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 C15orf54Q8N8G6 183 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ATP6V0D2Q8N8Y2 350 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ZNF248Q8NDW4 579 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 OR7G2Q8NG99 324 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 OR9A4Q8NGU2 314 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 TMIGD2Q96BF3 282 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 EFHD2Q96C19 240 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 ATF6BQ99941 703 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 NIPSNAP3BQ9BS92 247 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ILKAPQ9H0C8 392 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 SLITRK2Q9H156 845 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 MRPS30Q9NP92 439 aaKnown RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 C20orf96Q9NUD7 363 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 SLC2A6Q9UGQ3 507 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 RHBDD3Q9Y3P4 386 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 MYH1P12882 1939 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 TECPR2O15040 1411 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 KDM6AO15550 1401 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 ARFGEF2Q9Y6D5 1785 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 WDR81Q562E7 1941 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 A2ML1A8K2U0 1454 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 FLT4P35916 1363 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 TRBV11-1A0A0K0K1C0 115 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms