RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 ZNF385AQ96PM9 386 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 PANX1Q96RD7 426 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 ZBTB18Q99592 522 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 SLC38A1Q9H2H9 487 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 DYNLRB1Q9NP97 96 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 ADPRHL2Q9NX46 363 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 P2RX2Q9UBL9 471 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 TMEFF2Q9UIK5 374 aaPredicted RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 RAP2CQ9Y3L5 183 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 SPEF1Q9Y4P9 236 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 ANK3Q12955 4377 aaKnown RBP6.96□□□□□ -1.29
NIF3L1-209ENST00000454952 CUBNO60494 3623 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 CDHR4A6H8M9 788 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 CLDN24A6NM45 220 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 B4DSR2 109 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 RPL36A-HNRNPH2H7BZ11 118 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 BIRC5O15392 142 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 SLC43A1O75387 559 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 IGKV3-15P01624 115 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 CHRM4P08173 479 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 TFPTP0C1Z6 253 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 IFNGR1P15260 489 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF43P17038 809 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 NCF2P19878 526 aaPredicted RBP6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 ARRB2P32121 409 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 EVX1P49640 407 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 RPL14P50914 215 aaKnown RBP6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 CRISP3P54108 245 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 DVL1P1P54792 670 aaPredicted RBP6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 CDH15P55291 814 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 ABCE1P61221 599 aaKnown RBP6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 ROR2Q01974 943 aaKnown RBP6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 SYPL1Q16563 259 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 RNF220Q5VTB9 566 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 C1orf140Q5VVS0 124 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 OGFOD2Q6N063 350 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 NIPAL3Q6P499 406 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 C5orf46Q6UWT4 87 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 C12orf54Q6X4T0 127 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF621Q6ZSS3 439 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 CREB3L2Q70SY1 520 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 SPATA21Q7Z572 469 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 HMGN2P46Q86SG4 172 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 SNX32Q86XE0 403 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 GPR137CQ8N3F9 429 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 CADM2Q8N3J6 435 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 ANKFN1Q8N957 763 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 GLB1L3Q8NCI6 653 aaPredicted RBP6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 OR52P1PQ8NH57 321 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 MFSD8Q8NHS3 518 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 UBASH3BQ8TF42 649 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 SLC35B4Q969S0 331 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 ZMYND19Q96E35 227 aaPredicted RBP6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 ALKBH3Q96Q83 286 aaPredicted RBP6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 OR52E6Q96RD3 313 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 USP22Q9UPT9 525 aa6.96□□□□□ -1.3
NIF3L1-209ENST00000454952 A0A096LPE4 126 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 A0A1W2PPZ6 126 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 PRAMEF27A3QJZ7 478 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 LRP5LA4QPB2 252 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 RFXANKO14593 260 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 TM9SF1O15321 606 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 FRS3O43559 492 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 OR2T1O43869 369 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 RPLP1P05386 114 aaKnown RBP6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 ETV4P43268 484 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 SELENOPP49908 381 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 RPS23P62266 143 aaKnown RBP6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 PLAURQ03405 335 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 C1DQ13901 141 aaKnown RBP6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 CHI3L2Q15782 390 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 PDCD4Q53EL6 469 aaKnown RBP6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 SHQ1Q6PI26 577 aaKnown RBP6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 DEF8Q6ZN54 512 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 GLCCI1Q86VQ1 547 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 EPHX4Q8IUS5 362 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 SVOPLQ8N434 492 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF781Q8N8C0 355 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 PIK3C3Q8NEB9 887 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 CKAP2Q8WWK9 683 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 C1orf159Q96HA4 380 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 PPP1R36Q96LQ0 422 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 OXGR1Q96P68 337 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 SNX18Q96RF0 628 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 DOK1Q99704 481 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 MS4A5Q9H3V2 200 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 DENND2DQ9H6A0 471 aaPredicted RBP6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 SSU72Q9NP77 194 aaKnown RBP6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 FBXL3Q9UKT7 428 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 IFT52Q9Y366 437 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 GRIP1Q9Y3R0 1128 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 CMAHPQ9Y471 501 aa6.95□□□□□ -1.3
NIF3L1-209ENST00000454952 DYSFO75923 2080 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 IGHV2OR16-5A0A0B4J2B6 119 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 A0A0G2JPF8 293 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 LOC102725191A0A1B0GVB3 256 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 A6NHS1 94 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF99A8MXY4 864 aaPredicted RBP6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 HNRNPCL2B2RXH8 293 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 HNRNPCL3B7ZW38 293 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms