RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 CHRM4P08173 479 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 ADRA2AP08913 450 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 NR4A1P22736 598 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 GPR6P46095 362 aaPredicted RBP12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 SNTB2Q13425 540 aaKnown RBP12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 TRIP10Q15642 601 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 LIN52Q52LA3 116 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 RNF220Q5VTB9 566 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 C1orf140Q5VVS0 124 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 C5orf46Q6UWT4 87 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 EPHX4Q8IUS5 362 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 UBLCP1Q8WVY7 318 aaPredicted RBP12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 RDH5Q92781 318 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 SLC35B4Q969S0 331 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 MRPL24Q96A35 216 aaKnown RBP12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 ZNF416Q9BWM5 594 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 ZNF385DQ9H6B1 395 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 ARMC7Q9H6L4 198 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 NOX3Q9HBY0 568 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 ZDHHC2Q9UIJ5 367 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 A0A096LPE4 126 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 LOC102725191A0A1B0GVB3 256 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 A0A1W2PPZ6 126 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 PRAMEF27A3QJZ7 478 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 TMEM229AB2RXF0 380 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 NR5A2O00482 541 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 UPK3AO75631 287 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 ZNF432O94892 652 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 AHSA1O95433 338 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 PNPP00491 289 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 GSNP06396 782 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 IGFBP1P08833 259 aaPredicted RBP12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 SAGP10523 405 aaPredicted RBP12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 ZNF43P17038 809 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 CCNIQ14094 377 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 PRR31Q5SQ13 230 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 ZCCHC23Q6ZST2 131 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 LINGO2Q7L985 606 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 ANKRD46Q86W74 232 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 CDK20Q8IZL9 346 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 GPR137CQ8N3F9 429 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 ANKFN1Q8N957 763 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 PIK3C3Q8NEB9 887 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 CLDND2Q8NHS1 167 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 EPS8L3Q8TE67 593 aaKnown RBP12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 MECRQ9BV79 373 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 SUCNR1Q9BXA5 334 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 REV1Q9UBZ9 1251 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 DSPPQ9NZW4 1301 aa12.32□□□□□ -0.44
LYSMD3-202ENST00000453259 SMIM23A6NLE4 172 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 ZNF99A8MXY4 864 aaPredicted RBP12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 FTCDNL1E5RQL4 147 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 E9PBE3 544 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 CPSF4O95639 269 aaKnown RBP12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 NR2F1P10589 423 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 GTF2E2P29084 291 aaKnown RBP12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 ARRB2P32121 409 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 GLRXP35754 106 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 ACAA2P42765 397 aaKnown RBP12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 ARF1P84077 181 aaKnown RBP12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 SYPL1Q16563 259 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 ZNF627Q7L945 461 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 SNX32Q86XE0 403 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 RNF130Q86XS8 419 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 ZCCHC24Q8N2G6 241 aaKnown RBP12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 OXGR1Q96P68 337 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 SEC61A2Q9H9S3 476 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 CRLF2Q9HC73 371 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 GPR35Q9HC97 309 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 SLC52A3Q9NQ40 469 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 THUMPD1Q9NXG2 353 aaKnown RBP12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 ZNF346Q9UL40 294 aaKnown RBP12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 NOX1Q9Y5S8 564 aa12.31□□□□□ -0.44
LYSMD3-202ENST00000453259 SH3PXD2BA1X283 911 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 J3QLI3 93 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 OR2T1O43869 369 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 KRT75O95678 551 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 CELA3BP08861 270 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 MYZAPP0CAP1 466 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 GAAP10253 952 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 PNMTP11086 282 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 EPHA1P21709 976 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 S100A3P33764 101 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 TUBA1BP68363 451 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 TUBA4AP68366 448 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 NPRL3Q12980 569 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 LARS2Q15031 903 aaKnown RBP12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 SPANXN4Q5MJ08 99 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 ELFN2Q5R3F8 820 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 TUBA1AQ71U36 451 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 PEG10Q86TG7 708 aaKnown RBP12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 MDP1Q86V88 176 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 LRRC37BQ96QE4 947 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 PANX1Q96RD7 426 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 ZNF696Q9H7X3 374 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 AKTIPQ9H8T0 292 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 C12orf10Q9HB07 376 aa12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 CACYBPQ9HB71 228 aaKnown RBP12.3□□□□□ -0.44
LYSMD3-202ENST00000453259 SLC17A7Q9P2U7 560 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms