RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 MRPL11Q9Y3B7 192 aaKnown RBP3.92□□□□□ -1.78
HMGB1P26-201ENST00000452520 RPL36Q9Y3U8 105 aaKnown RBP3.92□□□□□ -1.78
HMGB1P26-201ENST00000452520 CSAG2Q9Y5P2 127 aa3.92□□□□□ -1.78
HMGB1P26-201ENST00000452520 LOC100653049A0A140TA62 436 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 A0A1W2PPV4 95 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 TUBAL3A6NHL2 446 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 SRRM5B3KS81 715 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 SLC17A2O00624 439 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 POLR3GO15318 223 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 KRT34O76011 436 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 SLC2A10O95528 541 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 SNAI1O95863 264 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 UBTFL1P0CB47 393 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 ABOP16442 354 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 CD9P21926 228 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 DDOSTP39656 456 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 VHLP40337 213 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 YAP1P46937 504 aaKnown RBP3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 RFX3P48380 749 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 ERVPABLB-1P60509 514 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 MRPS11P82912 194 aaKnown RBP3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 CYLC2Q14093 348 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 GNMTQ14749 295 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 LRRC49Q8IUZ0 686 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 C9orf40Q8IXQ3 194 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 SLC22A18ASQ8N1D0 253 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 OR2L2Q8NH16 312 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 LILRB4Q8NHJ6 448 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 C8orf44Q96CB5 159 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 ASB9Q96DX5 294 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 SLC29A1Q99808 456 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 RIOK1Q9BRS2 568 aaKnown RBP3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 CHIAQ9BZP6 476 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 GPATCH2LQ9NWQ4 482 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 STAP1Q9ULZ2 295 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 CLSPNQ9HAW4 1339 aa3.91□□□□□ -1.78
HMGB1P26-201ENST00000452520 PLEKHH1Q9ULM0 1364 aa3.9□□□□□ -1.78
HMGB1P26-201ENST00000452520 A0A0J9YYE9 177 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 KBTBD11-OT1A0A1B0GTJ5 212 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 A0A1B0GWB2 263 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 LRRIQ3A6PVS8 624 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 ZNF879B4DU55 563 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 AIM2O14862 343 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 UGT1A9O60656 530 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 NOL4O94818 638 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 STAMBPO95630 424 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 RENP00797 406 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 TRBC1P01850 177 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 SERPINE2P07093 398 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 H2AFZP0C0S5 128 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 UBCP0CG48 685 aaKnown RBP3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 RBMY1CP0DJD4 496 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 BCKDHBP21953 392 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 IL12AP29459 219 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 CALCRP30988 508 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 LONP1P36776 959 aaKnown RBP3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 GSSP48637 474 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 TMED10P49755 219 aaKnown RBP3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 HNRNPA3P51991 378 aaKnown RBP3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 YWHAGP61981 247 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 ZNF829Q3KNS6 432 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 HSDL1Q3SXM5 330 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 TCTEX1D4Q5JR98 221 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 SOHLH1Q5JUK2 328 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 ZNF506Q5JVG8 444 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 MLIPQ5VWP3 458 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 LEMD1Q68G75 181 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 REEP3Q6NUK4 255 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 ZNF836Q6ZNA1 936 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 SVOPLQ8N434 492 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 ACOT4Q8N9L9 421 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 OR4A15Q8NGL6 344 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 LKAAEAR1Q8TD35 194 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 PIBF1Q8WXW3 757 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 RAB1CQ92928 201 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 ANKRD9Q96BM1 317 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 ATP6V1G3Q96LB4 118 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 ATP5SQ99766 215 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 OR51M1Q9H341 326 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 CLN8Q9UBY8 286 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 LSM7Q9UK45 103 aaKnown RBP3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 MMP24Q9Y5R2 645 aa3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 BZW2Q9Y6E2 419 aaKnown RBP3.9□□□□□ -1.79
HMGB1P26-201ENST00000452520 TRBV9A0A0B4J1U6 114 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 LOC100506127A0A0U1RQW1 187 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 A0A1B0GUH1 482 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 K7ENP7 123 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 SIRPB1O00241 398 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 SIVA1O15304 175 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 RRP8O43159 456 aaKnown RBP3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 CHMP2AO43633 222 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 AIREO43918 545 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 HUS1O60921 280 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 MELTFP08582 738 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 CLTAP09496 248 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 MYL2P10916 166 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 LAMP1P11279 417 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 FOLR2P14207 255 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 IGHV1-2P23083 117 aa3.89□□□□□ -1.79
HMGB1P26-201ENST00000452520 ADORA2BP29275 332 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms