RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PUDPQ08623 228 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 GTF3C1Q12789 2109 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 GINS1Q14691 196 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 SLC27A4Q6P1M0 643 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 ARHGAP11AQ6P4F7 1023 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 PCSK4Q6UW60 755 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 H1FNTQ75WM6 255 aaPredicted RBP13.11□□□□□ -0.31
TNF-208ENST00000449264 KDM8Q8N371 416 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 TFAP2CQ92754 450 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 ZHX1-C8orf76Q96EF9 292 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 GPR137Q96N19 417 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 UCN2Q96RP3 112 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 RAB26Q9ULW5 256 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 A0A1B0GVC2 190 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 ZAR1LA6NP61 321 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 ZNF814B7Z6K7 855 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 M0R129 80 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 RAC3P60763 192 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 RPS3AP61247 264 aaKnown RBP13.1□□□□□ -0.31
TNF-208ENST00000449264 ADARB1P78563 741 aaKnown RBP13.1□□□□□ -0.31
TNF-208ENST00000449264 TOP3AQ13472 1001 aaPredicted RBP13.1□□□□□ -0.31
TNF-208ENST00000449264 BCL2A1Q16548 175 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 ANKDD1AQ495B1 522 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 TTC23Q5W5X9 447 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 PAQR6Q6TCH4 344 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 GPAT4Q86UL3 456 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 CCDC103Q8IW40 242 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 OR2T33Q8NG76 320 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 OR4Q3Q8NH05 313 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 FAM81AQ8TBF8 368 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 SARAFQ96BY9 339 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 SNRNP40Q96DI7 357 aaKnown RBP13.1□□□□□ -0.31
TNF-208ENST00000449264 WDYHV1Q96HA8 205 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 POLDIP3Q9BY77 421 aaKnown RBP13.1□□□□□ -0.31
TNF-208ENST00000449264 NDEL1Q9GZM8 345 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 TIGARQ9NQ88 270 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 TAS2R5Q9NYW4 299 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 KLHL13Q9P2N7 655 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 B3GALT5Q9Y2C3 310 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 ADAM18Q9Y3Q7 739 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 IGSF10Q6WRI0 2623 aa13.1□□□□□ -0.31
TNF-208ENST00000449264 AQP7P3A6NL99 342 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 H0YAE9 185 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 SLC16A6O15403 523 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 EIF1BO60739 113 aaKnown RBP13.09□□□□□ -0.31
TNF-208ENST00000449264 RAMP1O60894 148 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 ENPP1P22413 925 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 SMSP52788 366 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 MLLT10P55197 1068 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 CTXN1P60606 82 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 ERVK-25P63136 954 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 PGGHGQ32M88 737 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 PLXDC2Q6UX71 529 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 CHMP1BQ7LBR1 199 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 GHDCQ8N2G8 530 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 OR5M9Q8NGP3 310 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 FAR1Q8WVX9 515 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 CPNE4Q96A23 557 aaPredicted RBP13.09□□□□□ -0.31
TNF-208ENST00000449264 HRASLS5Q96KN8 279 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 CNBD2Q96M20 576 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 NAA11Q9BSU3 229 aaPredicted RBP13.09□□□□□ -0.31
TNF-208ENST00000449264 KATNB1Q9BVA0 655 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 Q9H521 79 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 ASF1BQ9NVP2 202 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 ZGRF1Q86YA3 2104 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 ALPK2Q86TB3 2170 aa13.09□□□□□ -0.31
TNF-208ENST00000449264 TTLL8A6PVC2 850 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 BHLHE40O14503 412 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 SMAD9O15198 467 aaKnown RBP13.08□□□□□ -0.31
TNF-208ENST00000449264 DNPH1O43598 174 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 FZD7O75084 574 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 TSPAN19P0C672 248 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 NOS3P29474 1203 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 GGT2P36268 569 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 GIPRP48546 466 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 P2RY4P51582 365 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 POU3F1Q03052 451 aaPredicted RBP13.08□□□□□ -0.31
TNF-208ENST00000449264 KEAP1Q14145 624 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 ZNF239Q16600 458 aaKnown RBP13.08□□□□□ -0.31
TNF-208ENST00000449264 SLC35F1Q5T1Q4 408 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 SLX4IPQ5VYV7 408 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 ZNF324BQ6AW86 544 aaPredicted RBP13.08□□□□□ -0.31
TNF-208ENST00000449264 TMEM225Q6GV28 225 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 ACSM5Q6NUN0 579 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 CASP12Q6UXS9 341 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 LRRC75AQ8NAA5 344 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 ADPRHL1Q8NDY3 354 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 ROBO4Q8WZ75 1007 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 MUS81Q96NY9 551 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 ERMAPQ96PL5 475 aaPredicted RBP13.08□□□□□ -0.31
TNF-208ENST00000449264 PITX2Q99697 317 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 SLC25A19Q9HC21 320 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 INIPQ9NRY2 104 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 IMPAD1Q9NX62 359 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 TVP23BQ9NYZ1 205 aa13.08□□□□□ -0.31
TNF-208ENST00000449264 NDRG4Q9ULP0 352 aaKnown RBP13.08□□□□□ -0.31
TNF-208ENST00000449264 MS4A18H0YCH9 400 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 SYNGR4O95473 234 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 HLA-DOBP13765 273 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms