RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SMSP52788 366 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 CDK5Q00535 292 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 KEAP1Q14145 624 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 ARHGAP11AQ6P4F7 1023 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 PAQR6Q6TCH4 344 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 IQCF1Q8N6M8 205 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 TMEM99Q8N816 258 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 SARAFQ96BY9 339 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 NAA11Q9BSU3 229 aaPredicted RBP17.5■□□□□ 0.39
SGCE-207ENST00000447873 TEX12Q9BXU0 123 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 NDRG4Q9ULP0 352 aaKnown RBP17.5■□□□□ 0.39
SGCE-207ENST00000447873 C11orf98E9PRG8 122 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 CXCL13O43927 109 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 PUDPQ08623 228 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 LY6DQ14210 128 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 DPY19L2P2Q6ZN68 376 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 IGFN1Q86VF2 1251 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 GPR137Q96N19 417 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 PITX2Q99697 317 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 SRXN1Q9BYN0 137 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 SLC25A19Q9HC21 320 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 CAMK2AQ9UQM7 478 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 A0A1B0GTH9 108 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 MCIDASD6RGH6 385 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 E9PQ18 207 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 F13BP05160 661 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 GNAO1P09471 354 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 CPN1P15169 458 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 ENPP1P22413 925 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 GGT2P36268 569 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 AGFG1P52594 562 aaKnown RBP17.49■□□□□ 0.39
SGCE-207ENST00000447873 CDC42P60953 191 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 H3F3AP84243 136 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 HSF1Q00613 529 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 IL18R1Q13478 541 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 KRTCAP3Q53RY4 240 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 SLX4IPQ5VYV7 408 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 TMEM225Q6GV28 225 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 ACSM5Q6NUN0 579 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 CASP12Q6UXS9 341 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 CHMP1BQ7LBR1 199 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 KDM8Q8N371 416 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 ADPRHL1Q8NDY3 354 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 OR4Q3Q8NH05 313 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 FAR1Q8WVX9 515 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 CPNE4Q96A23 557 aaPredicted RBP17.49■□□□□ 0.39
SGCE-207ENST00000447873 WDYHV1Q96HA8 205 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 ZNF845Q96IR2 970 aaPredicted RBP17.49■□□□□ 0.39
SGCE-207ENST00000447873 GPX7Q96SL4 187 aaPredicted RBP17.49■□□□□ 0.39
SGCE-207ENST00000447873 APOL4Q9BPW4 351 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 PAQR5Q9NXK6 330 aaPredicted RBP17.49■□□□□ 0.39
SGCE-207ENST00000447873 BAIAP2Q9UQB8 552 aa17.49■□□□□ 0.39
SGCE-207ENST00000447873 SVILO95425 2214 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 AQP7P3A6NL99 342 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 NPIPA2E9PIF3 369 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 NPIPA3F8WFD2 350 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 MS4A18H0YCH9 400 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 BHLHE40O14503 412 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 PPP1R3DO95685 299 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 CTXN1P60606 82 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 MYBPC1Q00872 1141 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 ZP4Q12836 540 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 C3AR1Q16581 482 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 PGGHGQ32M88 737 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 MS4A18Q3C1V0 323 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 ZNF324BQ6AW86 544 aaPredicted RBP17.48■□□□□ 0.39
SGCE-207ENST00000447873 CCDC103Q8IW40 242 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 GHDCQ8N2G8 530 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 LNX2Q8N448 690 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 LRRC75AQ8NAA5 344 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 MUS81Q96NY9 551 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 KATNB1Q9BVA0 655 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 ANKRD60Q9BZ19 345 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 PRRG3Q9BZD7 231 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 NRIP3Q9NQ35 241 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 INIPQ9NRY2 104 aa17.48■□□□□ 0.39
SGCE-207ENST00000447873 IGHV3-15A0A0B4J1V0 119 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 A0A1W2PNV4 684 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 OR14I1A6ND48 311 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 DENRO43583 198 aaKnown RBP17.47■□□□□ 0.39
SGCE-207ENST00000447873 SERPINI2O75830 405 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 PLGP00747 810 aaPredicted RBP17.47■□□□□ 0.39
SGCE-207ENST00000447873 CD14P08571 375 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 ACADSP16219 412 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 NOS3P29474 1203 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 P2RY4P51582 365 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 RPS6KA3P51812 740 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 ERVK-25P63136 954 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 ZNF239Q16600 458 aaKnown RBP17.47■□□□□ 0.39
SGCE-207ENST00000447873 ZNF691Q5VV52 312 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 C12orf73Q69YU5 71 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 USP51Q70EK9 711 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 PXKQ7Z7A4 578 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 GPAT4Q86UL3 456 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 C8orf59Q8N0T1 100 aaPredicted RBP17.47■□□□□ 0.39
SGCE-207ENST00000447873 SETD9Q8NE22 299 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 ANKK1Q8NFD2 765 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 FAM81AQ8TBF8 368 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 SNRNP40Q96DI7 357 aaKnown RBP17.47■□□□□ 0.39
SGCE-207ENST00000447873 CNBD2Q96M20 576 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms