RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 RAB4AP20338 218 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 OMPP47874 163 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 GFOD2Q3B7J2 385 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 PLEKHN1Q494U1 663 aaPredicted RBP17.64■□□□□ 0.41
HMGA1-205ENST00000447654 CLEC12AQ5QGZ9 265 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 PLEKHS1Q5SXH7 462 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 ATPAF1Q5TC12 328 aaPredicted RBP17.64■□□□□ 0.41
HMGA1-205ENST00000447654 TCEAL6Q6IPX3 200 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 CPOQ8IVL8 374 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 TMEM99Q8N816 258 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 OR2AP1Q8NGE2 309 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 GHSRQ92847 366 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 WNT2BQ93097 391 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 HAVCR1Q96D42 359 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 WFDC6Q9BQY6 131 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 NEUROD4Q9HD90 331 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 TP53TG5Q9Y2B4 290 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 POMT1Q9Y6A1 747 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 NOTCH4Q99466 2003 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 OR2AT4A6NND4 320 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 M0R3H8 397 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 OGG1O15527 345 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 FADS1O60427 444 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 MOSPD3O75425 235 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 LY86O95711 162 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 GNSP15586 552 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 NQO2P16083 231 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 HIST1H1BP16401 226 aaKnown RBP17.63■□□□□ 0.41
HMGA1-205ENST00000447654 NDUFB7P17568 137 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 DLSTP36957 453 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 PPP2CBP62714 309 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 PPP2CAP67775 309 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 INPP5JQ15735 1006 aaPredicted RBP17.63■□□□□ 0.41
HMGA1-205ENST00000447654 OR52W1Q6IF63 320 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 CRTC1Q6UUV9 634 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 COMMD6Q7Z4G1 85 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 OR5M8Q8NGP6 311 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 C1orf216Q8TAB5 229 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 SLAMF9Q96A28 289 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 RIOK2Q9BVS4 552 aaKnown RBP17.63■□□□□ 0.41
HMGA1-205ENST00000447654 ZDHHC3Q9NYG2 299 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 P2RX2Q9UBL9 471 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 ETV7Q9Y603 341 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 SPTBN5Q9NRC6 3674 aaKnown RBP17.63■□□□□ 0.41
HMGA1-205ENST00000447654 F5H0A9 414 aaPredicted RBP17.63■□□□□ 0.41
HMGA1-205ENST00000447654 CD74P04233 296 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 CASRP41180 1078 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 CAV2P51636 162 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 ST8SIA6P61647 398 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 RPS13P62277 151 aaKnown RBP17.63■□□□□ 0.41
HMGA1-205ENST00000447654 PNLIPRP3Q17RR3 467 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 TNFAIP8L2Q6P589 184 aaPredicted RBP17.63■□□□□ 0.41
HMGA1-205ENST00000447654 TMPRSS11BQ86T26 416 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 GLB1L2Q8IW92 636 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 C17orf47Q8NEP4 570 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 SAT2Q96F10 170 aaPredicted RBP17.63■□□□□ 0.41
HMGA1-205ENST00000447654 HSPA12BQ96MM6 686 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 MOGAT1Q96PD6 335 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 NAA11Q9BSU3 229 aaPredicted RBP17.63■□□□□ 0.41
HMGA1-205ENST00000447654 ZMIZ1Q9ULJ6 1067 aa17.63■□□□□ 0.41
HMGA1-205ENST00000447654 TMEM184BQ9Y519 407 aaPredicted RBP17.63■□□□□ 0.41
HMGA1-205ENST00000447654 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.62■□□□□ 0.41
HMGA1-205ENST00000447654 SLC22A31A6NKX4 558 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 H7C417 338 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 HMGN4O00479 90 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 ZNF197O14709 1029 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 BCAT2O15382 392 aaPredicted RBP17.62■□□□□ 0.41
HMGA1-205ENST00000447654 TBX19O60806 448 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 HOXB5P09067 269 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 HOXA5P20719 270 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 CSNK1DP48730 415 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 ACTC1P68032 377 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 ACTA1P68133 377 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 SRSF3P84103 164 aaKnown RBP17.62■□□□□ 0.41
HMGA1-205ENST00000447654 OR10K2Q6IF99 312 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 MED27Q6P2C8 311 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 BBS10Q8TAM1 723 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 CLCC1Q96S66 551 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 ATG10Q9H0Y0 220 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 KRCC1Q9NPI7 259 aaPredicted RBP17.62■□□□□ 0.41
HMGA1-205ENST00000447654 FAM86C1Q9NVL1 165 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 MTFP1Q9UDX5 166 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 TMEM72A0PK05 275 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 IFITM5A6NNB3 132 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 H7BY64 318 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 MFNGO00587 321 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 SOCS5O75159 536 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 RBBP9O75884 186 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 IGSF6O95976 241 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 CH25HO95992 272 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 RAB5AP20339 215 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 PPP2R1BP30154 601 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 CEACAM6P40199 344 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 RBM34P42696 430 aaKnown RBP17.62■□□□□ 0.41
HMGA1-205ENST00000447654 PKIAP61925 76 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 MC1RQ01726 317 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 C4orf46Q504U0 113 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 ZNF311Q5JNZ3 666 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 ZNF620Q6ZNG0 422 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 ZNF383Q8NA42 475 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms