RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 LYNX1G3V0Z9 82 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 RPL36A-HNRNPH2H7BZ11 118 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 ITM2AO43736 263 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 SLC43A1O75387 559 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 AHSA1O95433 338 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 LYNX1P0DP58 116 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 ZNF43P17038 809 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 LBPP18428 481 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 GTF2E2P29084 291 aaKnown RBP21.06■□□□□ 0.96
PMS1-214ENST00000446877 ACAA2P42765 397 aaKnown RBP21.06■□□□□ 0.96
PMS1-214ENST00000446877 CAPZA2P47755 286 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 CLDN17P56750 224 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 ACTG1P63261 375 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 SNTB2Q13425 540 aaKnown RBP21.06■□□□□ 0.96
PMS1-214ENST00000446877 CCDC36Q8IYA8 594 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 CDK20Q8IZL9 346 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 GPR137CQ8N3F9 429 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 SLC25A36Q96CQ1 311 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 TPK1Q9H3S4 243 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 CRLF2Q9HC73 371 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 LGALS13Q9UHV8 139 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 RCE1Q9Y256 329 aa21.06■□□□□ 0.96
PMS1-214ENST00000446877 C1DQ13901 141 aaKnown RBP21.05■□□□□ 0.96
PMS1-214ENST00000446877 SHQ1Q6PI26 577 aaKnown RBP21.05■□□□□ 0.96
PMS1-214ENST00000446877 MYPOPQ86VE0 399 aaPredicted RBP21.05■□□□□ 0.96
PMS1-214ENST00000446877 VRK2Q86Y07 508 aa21.05■□□□□ 0.96
PMS1-214ENST00000446877 KDM8Q8N371 416 aa21.05■□□□□ 0.96
PMS1-214ENST00000446877 MFSD8Q8NHS3 518 aa21.05■□□□□ 0.96
PMS1-214ENST00000446877 PNPT1Q8TCS8 783 aaKnown RBP21.05■□□□□ 0.96
PMS1-214ENST00000446877 STK35Q8TDR2 534 aa21.05■□□□□ 0.96
PMS1-214ENST00000446877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.05■□□□□ 0.96
PMS1-214ENST00000446877 ZMYND19Q96E35 227 aaPredicted RBP21.05■□□□□ 0.96
PMS1-214ENST00000446877 CACYBPQ9HB71 228 aaKnown RBP21.05■□□□□ 0.96
PMS1-214ENST00000446877 WDR91A4D1P6 747 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 KRT75O95678 551 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 GSNP06396 782 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 RPL14P50914 215 aaKnown RBP21.04■□□□□ 0.96
PMS1-214ENST00000446877 NME5P56597 212 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 ABCE1P61221 599 aaKnown RBP21.04■□□□□ 0.96
PMS1-214ENST00000446877 LRRC74AQ0VAA2 488 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 LARS2Q15031 903 aaKnown RBP21.04■□□□□ 0.96
PMS1-214ENST00000446877 COX20Q5RI15 118 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 ATG16L1Q676U5 607 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 KRT80Q6KB66 452 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 ZNF836Q6ZNA1 936 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 MDP1Q86V88 176 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 LRRC34Q8IZ02 419 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 C3orf56Q8N813 242 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 ZNF418Q8TF45 676 aaPredicted RBP21.04■□□□□ 0.96
PMS1-214ENST00000446877 ARMC7Q9H6L4 198 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 NOX3Q9HBY0 568 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 GPR35Q9HC97 309 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 HIF1ANQ9NWT6 349 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 CALML5Q9NZT1 146 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 P2RX2Q9UBL9 471 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 REV1Q9UBZ9 1251 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 ZNF232Q9UNY5 417 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 USP22Q9UPT9 525 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.04■□□□□ 0.96
PMS1-214ENST00000446877 RAP2CQ9Y3L5 183 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 GRIP1Q9Y3R0 1128 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 SPEF1Q9Y4P9 236 aa21.04■□□□□ 0.96
PMS1-214ENST00000446877 SYNGR3O43761 229 aa21.03■□□□□ 0.96
PMS1-214ENST00000446877 NPIPB7O75200 414 aa21.03■□□□□ 0.96
PMS1-214ENST00000446877 SERPINE1P05121 402 aa21.03■□□□□ 0.96
PMS1-214ENST00000446877 PNMTP11086 282 aa21.03■□□□□ 0.96
PMS1-214ENST00000446877 POU3F1Q03052 451 aaPredicted RBP21.03■□□□□ 0.96
PMS1-214ENST00000446877 CHI3L2Q15782 390 aa21.03■□□□□ 0.96
PMS1-214ENST00000446877 DEF8Q6ZN54 512 aa21.03■□□□□ 0.96
PMS1-214ENST00000446877 GCDHQ92947 438 aaPredicted RBP21.03■□□□□ 0.96
PMS1-214ENST00000446877 TMEM186Q96B77 213 aa21.03■□□□□ 0.96
PMS1-214ENST00000446877 PKNOX2Q96KN3 472 aa21.03■□□□□ 0.96
PMS1-214ENST00000446877 OR52E6Q96RD3 313 aa21.03■□□□□ 0.96
PMS1-214ENST00000446877 MS4A5Q9H3V2 200 aa21.03■□□□□ 0.96
PMS1-214ENST00000446877 M0R233 179 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 ZNF432O94892 652 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 IGFBP1P08833 259 aaPredicted RBP21.02■□□□□ 0.96
PMS1-214ENST00000446877 PRG2P13727 222 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 CREB1P16220 341 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 CDKN2CP42773 168 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 ETV4P43268 484 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 GPR6P46095 362 aaPredicted RBP21.02■□□□□ 0.96
PMS1-214ENST00000446877 EVX1P49640 407 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 UFM1P61960 85 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 CEACAM16Q2WEN9 425 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 KIRREL3Q8IZU9 778 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 PIK3C3Q8NEB9 887 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 SEMA6DQ8NFY4 1073 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 OXGR1Q96P68 337 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 NUF2Q9BZD4 464 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 ROPN1BQ9BZX4 212 aaPredicted RBP21.02■□□□□ 0.96
PMS1-214ENST00000446877 ROPN1Q9HAT0 212 aaPredicted RBP21.02■□□□□ 0.96
PMS1-214ENST00000446877 ZNF443Q9Y2A4 671 aaPredicted RBP21.02■□□□□ 0.96
PMS1-214ENST00000446877 NOX1Q9Y5S8 564 aa21.02■□□□□ 0.96
PMS1-214ENST00000446877 NR4A1P22736 598 aa21.01■□□□□ 0.95
PMS1-214ENST00000446877 RPS5P46782 204 aaKnown RBP21.01■□□□□ 0.95
PMS1-214ENST00000446877 CRISP3P54108 245 aa21.01■□□□□ 0.95
PMS1-214ENST00000446877 SLC9B1Q4ZJI4 515 aa21.01■□□□□ 0.95
PMS1-214ENST00000446877 RNF220Q5VTB9 566 aa21.01■□□□□ 0.95
PMS1-214ENST00000446877 REP15Q6BDI9 236 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms