RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 PYROXD1Q8WU10 500 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 CPB2Q96IY4 423 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 ZNF317Q96PQ6 595 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 KCNK16Q96T55 309 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 CNPY3Q9BT09 278 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 TMEM121Q9BTD3 319 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 CALN1Q9BXU9 219 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 GCOM2Q9BZD3 368 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 ELOVL4Q9GZR5 314 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 TRABDQ9H4I3 376 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 SMYD3Q9H7B4 428 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 ZNF275Q9NSD4 429 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 VNN3Q9NY84 501 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 B4GALT7Q9UBV7 327 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 TBK1Q9UHD2 729 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 MOKQ9UQ07 419 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 ARL2BPQ9Y2Y0 163 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 CITO14578 2027 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 ZNF318Q5VUA4 2279 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 MCM3APO60318 1980 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 RAI1Q7Z5J4 1906 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 CLUHO75153 1309 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 NRCAMQ92823 1304 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 CCL15-CCL14A0A0B4J2E2 113 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 FAM230AA0A1W2PPH8 454 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 ZSCAN5BA6NJL1 495 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 E7ESA3 106 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 H7C0C1 242 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 CHADO15335 359 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 PPIHO43447 177 aaKnown RBP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 DCTN3O75935 186 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 ATP5HO75947 161 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 GSTT2P0CG29 244 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 GSTT2BP0CG30 244 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 TROVE2P10155 538 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 RRASP10301 218 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 ARF4P18085 180 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 AXLP30530 894 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 ALDH3A1P30838 453 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 ATP5OP48047 213 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 SARNPP82979 210 aaKnown RBP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 BST2Q10589 180 aaKnown RBP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 XRCC4Q13426 336 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 EXOSC2Q13868 293 aaKnown RBP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 PDK4Q16654 411 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 CCL15Q16663 113 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 KCTD19Q17RG1 926 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 BOLA3Q53S33 107 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 FAM120AOSQ5T036 256 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 SLX4IPQ5VYV7 408 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 UFSP1Q6NVU6 142 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 RGS9BPQ6ZS82 235 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 FAM183BPQ6ZVS7 135 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 CYS1Q717R9 158 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 BZW1Q7L1Q6 419 aaKnown RBP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 LPCAT2Q7L5N7 544 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 UNC93AQ86WB7 457 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 C9orf40Q8IXQ3 194 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 FBXO36Q8NEA4 188 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 JOSD2Q8TAC2 188 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 RXFP2Q8WXD0 754 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 FAF2Q96CS3 445 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 CYTH2Q99418 400 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 PAIP2Q9BPZ3 127 aaKnown RBP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 ZNF670Q9BS34 389 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 DPH7Q9BTV6 452 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 TBC1D10AQ9BXI6 508 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 IQCGQ9H095 443 aaKnown RBP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 ACTR8Q9H981 624 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 SLC40A1Q9NP59 571 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 FGFR1OP2Q9NVK5 253 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 EURLQ9NYK6 297 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 ATXN10Q9UBB4 475 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 HMGXB4Q9UGU5 601 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 PCSK1NQ9UHG2 260 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 CYTH4Q9UIA0 394 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 XPO7Q9UIA9 1087 aaKnown RBP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 CLEC4EQ9ULY5 219 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 UBQLN1Q9UMX0 589 aaKnown RBP3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 USH1CQ9Y6N9 552 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 SCN4AP35499 1836 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 ZNF236Q9UL36 1845 aa3.26□□□□□ -1.89
HMGB3P6-201ENST00000444896 A0A0U1RQV5 110 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 A8MXQ7 604 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 HACD1B0YJ81 288 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 GOLGA8MH3BSY2 632 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 I3L4J1 428 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 HUS1O60921 280 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 SPAG7O75391 227 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 CA3P07451 260 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 IQCF3P0C7M6 154 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 NEFHP12036 1026 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 XRCC1P18887 633 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 TPSB2P20231 275 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 TAC1P20366 129 aa3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 PTBP1P26599 531 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 RPL22P35268 128 aaKnown RBP3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 RPL4P36578 427 aaKnown RBP3.25□□□□□ -1.89
HMGB3P6-201ENST00000444896 FDFT1P37268 417 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms